RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 INO80DQ53TQ3 878 aaPredicted RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 TECRLQ5HYJ1 363 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 Q6ZNB5 142 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 RPS27LQ71UM5 84 aaKnown RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 ERI1Q8IV48 349 aaKnown RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 DCAF4L2Q8NA75 395 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 BHLHE22Q8NFJ8 381 aaPredicted RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 GFM2Q969S9 779 aaKnown RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 RPL10LQ96L21 214 aaKnown RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 SERPINI1Q99574 410 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 CCT7Q99832 543 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 SLC2A11Q9BYW1 496 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 LHX3Q9UBR4 397 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 MAFFQ9ULX9 164 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 PADI4Q9UM07 663 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 PRPF19Q9UMS4 504 aaKnown RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 ZNF711Q9Y462 761 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 BOLA2-SMG1P6H3BVE0 249 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 HDAC3O15379 428 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 SMAD6O43541 496 aaKnown RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 GREM1O60565 184 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 RFPL2O75678 378 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 CYBBP04839 570 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 MC4RP32245 332 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 CDKN1CP49918 316 aaPredicted RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 MS4A2Q01362 244 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 ACAP2Q15057 778 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 ADRM1Q16186 407 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 ZNF423Q2M1K9 1284 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 EML3Q32P44 896 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 ZFP1Q6P2D0 407 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 ZNF549Q6P9A3 640 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 EPGNQ6UW88 154 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 TMEM207Q6UWW9 146 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 TAS2R42Q7RTR8 314 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 SNX32Q86XE0 403 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 CAMK1DQ8IU85 385 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 TMEM126BQ8IUX1 230 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 DSELQ8IZU8 1212 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 TSPAN14Q8NG11 270 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 USP13Q92995 863 aaPredicted RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 OR52B2Q96RD2 323 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 TNKS2Q9H2K2 1166 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 EVLQ9UI08 416 aaPredicted RBP14.06□□□□□ -0.16
LIMD1-202ENST00000440097 CLEC4EQ9ULY5 219 aa14.06□□□□□ -0.16
LIMD1-202ENST00000440097 LCHNA4D1U4 455 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 LEFTY2O00292 366 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 NRG2O14511 850 aaPredicted RBP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 CFLARO15519 480 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 IPO13O94829 963 aaKnown RBP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 ALPIP09923 528 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 KCNA5P22460 613 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 VARSP26640 1264 aaKnown RBP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 GKP32189 559 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 STT3AP46977 705 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 HSPA13P48723 471 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 NSUN2Q08J23 767 aaKnown RBP eCLIP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 MPPE1Q53F39 396 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 NCEH1Q6PIU2 408 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 BNC2Q6ZN30 1099 aaPredicted RBP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 PIWIL4Q7Z3Z4 852 aaKnown RBP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 GALNT7Q86SF2 657 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 TMC8Q8IU68 726 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 CMTM8Q8IZV2 173 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 TRIML2Q8N7C3 387 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 SLC46A2Q9BY10 475 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 PKP3Q9Y446 797 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 DOCK6Q96HP0 2047 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 A8MT66 165 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 TMEM233B4DJY2 109 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 THRAP10827 490 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 PSMC3P17980 439 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 NELFEP18615 380 aaKnown RBP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 OGNP20774 298 aaKnown RBP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 PIK3R1P27986 724 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 ARMC12Q5T9G4 340 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 C16orf89Q6UX73 402 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 LPCAT2Q7L5N7 544 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 KYQ8NBH2 561 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 CCDC126Q96EE4 140 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 UBXN10Q96LJ8 280 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 FAIMQ9NVQ4 179 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 A8MX80 341 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 MATN2O00339 956 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 PFDN6O15212 129 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 SUPT7LO94864 414 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 ZNF23P17027 643 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 TSPAN8P19075 237 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 CDK9P50750 372 aaKnown RBP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 FPGSQ05932 587 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 LMAN2Q12907 356 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 PPIGQ13427 754 aaKnown RBP eCLIP14.05□□□□□ -0.162e-8■□□□□ 11.3
LIMD1-202ENST00000440097 CEACAM7Q14002 265 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 SLC14A2Q15849 920 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 PTPRNQ16849 979 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 PIGGQ5H8A4 983 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 C1QTNF12Q5T7M4 302 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 SMYD1Q8NB12 490 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 GPR150Q8NGU9 434 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 GRIN3AQ8TCU5 1115 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms