RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 NRP2O60462 931 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 MATN4O95460 622 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 PFKLP17858 780 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 PEX2P28328 305 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 MAPK8P45983 427 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 FLOT2Q14254 428 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 LRRC26Q2I0M4 334 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 PLEKHG6Q3KR16 790 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 MPPE1Q53F39 396 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 LPCAT4Q643R3 524 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 UGT3A1Q6NUS8 523 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 ZFP1Q6P2D0 407 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 PAOXQ6QHF9 649 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 RETREG3Q86VR2 466 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 ZSWIM9Q86XI8 627 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 TICAM1Q8IUC6 712 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 TMEM126BQ8IUX1 230 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 PQLC1Q8N2U9 271 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 HIPK4Q8NE63 616 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 MRPS31Q92665 395 aaKnown RBP13.82□□□□□ -0.2
HOXC4-202ENST00000430889 DLG3Q92796 817 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 NR1H4Q96RI1 486 aaPredicted RBP13.82□□□□□ -0.2
HOXC4-202ENST00000430889 GPR63Q9BZJ6 419 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 SDR39U1Q9NRG7 319 aaPredicted RBP13.82□□□□□ -0.2
HOXC4-202ENST00000430889 TMEM181Q9P2C4 612 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 RIMS3Q9UJD0 308 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 ASB1Q9Y576 335 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 NOTCH4Q99466 2003 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 CAPN8A6NHC0 703 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 BBIP1A8MTZ0 92 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 MRASO14807 208 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 KIAA0355O15063 1070 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 VPS4BO75351 444 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 FGF18O76093 207 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 ESRRBO95718 433 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 PIM1P11309 404 aaPredicted RBP13.82□□□□□ -0.2
HOXC4-202ENST00000430889 PRDX3P30048 256 aaKnown RBP13.82□□□□□ -0.2
HOXC4-202ENST00000430889 CD70P32970 193 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 DGKKQ5KSL6 1271 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 METTL3Q86U44 580 aaKnown RBP13.82□□□□□ -0.2
HOXC4-202ENST00000430889 GPSM1Q86YR5 675 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 SNX31Q8N9S9 440 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 DDI1Q8WTU0 396 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 MIEF2Q96C03 454 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 ASB9Q96DX5 294 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 LYSMD1Q96S90 227 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 GPATCH1Q9BRR8 931 aaKnown RBP13.82□□□□□ -0.2
HOXC4-202ENST00000430889 KLHL4Q9C0H6 718 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 NUDT4Q9NZJ9 180 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 KIAA1522Q9P206 1035 aaPredicted RBP13.82□□□□□ -0.2
HOXC4-202ENST00000430889 GIMAP2Q9UG22 337 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 SLC30A1Q9Y6M5 507 aa13.82□□□□□ -0.2
HOXC4-202ENST00000430889 TRAV19A0A0A6YYK7 116 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 AGAP14A8MT82 685 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 IQCF5A8MTL0 148 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 BAIAP3O94812 1187 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 MLYCDO95822 493 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 C8BP07358 591 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 LBPP18428 481 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 ZFP36L2P47974 494 aaKnown RBP13.81□□□□□ -0.2
HOXC4-202ENST00000430889 HTRA4P83105 476 aaPredicted RBP13.81□□□□□ -0.2
HOXC4-202ENST00000430889 BCL2L1Q07817 233 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 ADGRE1Q14246 886 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 SBSNQ6UWP8 590 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 TAS2R42Q7RTR8 314 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 SNX20Q7Z614 316 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 SERPINA9Q86WD7 417 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 CBARPQ8N350 705 aaPredicted RBP13.81□□□□□ -0.2
HOXC4-202ENST00000430889 PCDH20Q8N6Y1 951 aaKnown RBP13.81□□□□□ -0.2
HOXC4-202ENST00000430889 BHLHE22Q8NFJ8 381 aaPredicted RBP13.81□□□□□ -0.2
HOXC4-202ENST00000430889 OR6K2Q8NGY2 324 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 LKAAEAR1Q8TD35 194 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 BHMTQ93088 406 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 PPP2R3CQ969Q6 453 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 ECHDC3Q96DC8 303 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 DUS3LQ96G46 650 aaKnown RBP13.81□□□□□ -0.2
HOXC4-202ENST00000430889 KLHL32Q96NJ5 620 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 ZNF382Q96SR6 550 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 VCX3BQ9H321 246 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 IL26Q9NPH9 171 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 SEMA4BQ9NPR2 832 aaPredicted RBP13.81□□□□□ -0.2
HOXC4-202ENST00000430889 MAP10Q9P2G4 905 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 BCAP29Q9UHQ4 241 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 PPIL1Q9Y3C6 166 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 SH3BP1Q9Y3L3 701 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 GPR45Q9Y5Y3 372 aa13.81□□□□□ -0.2
HOXC4-202ENST00000430889 PRORSD1PA6NEY8 169 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 FXYD1O00168 92 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 LEFTY2O00292 366 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 PRAMEF1O95521 474 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 CKMP06732 381 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 UROSP10746 265 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 BPIP17213 487 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 CHRM3P20309 590 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 GKP32189 559 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 MSX2P35548 267 aaPredicted RBP13.8□□□□□ -0.2
HOXC4-202ENST00000430889 HNF1BP35680 557 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 MRPS22P82650 360 aaKnown RBP13.8□□□□□ -0.2
HOXC4-202ENST00000430889 ECT2LQ008S8 904 aa13.8□□□□□ -0.2
HOXC4-202ENST00000430889 TRAP1Q12931 704 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms