RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 HIPK1Q86Z02 1210 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 HID1Q8IV36 788 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ULK2Q8IYT8 1036 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ZCCHC7Q8N3Z6 543 aaKnown RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ATP6V1C2Q8NEY4 427 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 MOSPD2Q8NHP6 518 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 PCDH19Q8TAB3 1148 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 SPOCK2Q92563 424 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 SLC9A6Q92581 669 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ZNF607Q96SK3 696 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 BCL2L14Q9BZR8 327 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 LMAN2LQ9H0V9 348 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ARL8BQ9NVJ2 186 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 DUX4Q9UBX2 424 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 FBXW2Q9UKT8 454 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 A0A1W2PQ67 120 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 PSMD11O00231 422 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 SERPINB7O75635 380 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 IL6P05231 212 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ANPEPP15144 967 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ZNF24P17028 368 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 EFNA1P20827 205 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 C2orf80Q0P641 193 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 PEX6Q13608 980 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 GTF2H2Q13888 395 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 NPY5RQ15761 445 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 GTF2H2CQ6P1K8 395 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 HDDC3Q8N4P3 179 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 UBASH3BQ8TF42 649 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CYB5D2Q8WUJ1 264 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 RIPOR3Q96MK2 946 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 SLC38A2Q96QD8 506 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CCSER2Q9H7U1 834 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ELL3Q9HB65 397 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ADGRE2Q9UHX3 823 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 COLEC10Q9Y6Z7 277 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CICQ96RK0 1608 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 DHRS12A0PJE2 317 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 OR1F1O43749 312 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 EDF1O60869 148 aaKnown RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 STK16O75716 305 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 TOP3BO95985 862 aaKnown RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 BMP7P18075 431 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 NT5EP21589 574 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CDH3P22223 829 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 PTDSS1P48651 473 aaKnown RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 NRLP54845 237 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 MYBPC1Q00872 1141 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 MTX3Q5HYI7 312 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 TSTD2Q5T7W7 516 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 PRSS58Q8IYP2 241 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 LRRC57Q8N9N7 239 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 FAM98AQ8NCA5 519 aaKnown RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 RNASE11Q8TAA1 199 aaKnown RBP7.87□□□□□ -1.15
CTNND1-207ENST00000426142 SIX2Q9NPC8 291 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ARHGEF3Q9NR81 526 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CLDND1Q9NY35 253 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 SIRPGQ9P1W8 387 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 ERVW-1Q9UQF0 538 aa7.87□□□□□ -1.15
CTNND1-207ENST00000426142 CENPXA8MT69 81 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 FPGTO14772 594 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 CLDN9O95484 217 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 ST13P50502 369 aaKnown RBP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 POLR2JP52435 117 aaKnown RBP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 DGUOKQ16854 277 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 VPS26BQ4G0F5 336 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 UBXN11Q5T124 520 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 IRGCQ6NXR0 463 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 DNAJB7Q7Z6W7 309 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 GALNT5Q7Z7M9 940 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 PACS2Q86VP3 889 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 CPNE9Q8IYJ1 553 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 DAW1Q8N136 415 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 ZNF366Q8N895 744 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 GSTCDQ8NEC7 633 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 XAGE5Q8WWM1 108 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 C11orf84Q9BUA3 381 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 C3orf14Q9HBI5 128 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 INTS7Q9NVH2 962 aaKnown RBP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 IQCMA0A1B0GVH7 501 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 MED26O95402 600 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 ZBTB11O95625 1053 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 TFPIP10646 304 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 GNPDA1P46926 289 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 IL10RBQ08334 325 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 GRSF1Q12849 480 aaKnown RBP eCLIP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 KRR1Q13601 381 aaKnown RBP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 MINDY4Q4G0A6 757 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 FSTL4Q6MZW2 842 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 SPPL2CQ8IUH8 684 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 SLC43A3Q8NBI5 491 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 TEX47Q8TBZ9 253 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 ZFRQ96KR1 1074 aaKnown RBP7.86□□□□□ -1.15
CTNND1-207ENST00000426142 EPB41L1Q9H4G0 881 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 RNPEPL1Q9HAU8 725 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 SLC17A6Q9P2U8 582 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 SPATA2Q9UM82 520 aa7.86□□□□□ -1.15
CTNND1-207ENST00000426142 MRPS33Q9Y291 106 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms