RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 KITP10721 976 aa15.06■□□□□ 0
ACTB-204ENST00000425660 MTHFD2P13995 350 aa15.06■□□□□ 0
ACTB-204ENST00000425660 HNRNPLP14866 589 aaKnown RBP eCLIP15.06■□□□□ 0
ACTB-204ENST00000425660 IL12RB1P42701 662 aa15.06■□□□□ 0
ACTB-204ENST00000425660 HK2P52789 917 aa15.06■□□□□ 0
ACTB-204ENST00000425660 AQP5P55064 265 aa15.06■□□□□ 0
ACTB-204ENST00000425660 CORO7P57737 925 aa15.06■□□□□ 0
ACTB-204ENST00000425660 IL2P60568 153 aa15.06■□□□□ 0
ACTB-204ENST00000425660 BNIP1Q12981 228 aa15.06■□□□□ 0
ACTB-204ENST00000425660 HTR4Q13639 388 aa15.06■□□□□ 0
ACTB-204ENST00000425660 ADGRE1Q14246 886 aa15.06■□□□□ 0
ACTB-204ENST00000425660 OR4D1Q15615 310 aa15.06■□□□□ 0
ACTB-204ENST00000425660 ARL13AQ5H913 290 aaPredicted RBP15.06■□□□□ 0
ACTB-204ENST00000425660 ERAP2Q6P179 960 aa15.06■□□□□ 0
ACTB-204ENST00000425660 TRIM67Q6ZTA4 783 aa15.06■□□□□ 0
ACTB-204ENST00000425660 NUDT18Q6ZVK8 323 aa15.06■□□□□ 0
ACTB-204ENST00000425660 HSD11B1LQ7Z5J1 315 aa15.06■□□□□ 0
ACTB-204ENST00000425660 STAG3L4Q8TBR4 150 aa15.06■□□□□ 0
ACTB-204ENST00000425660 SGF29Q96ES7 293 aa15.06■□□□□ 0
ACTB-204ENST00000425660 TMEM237Q96Q45 408 aa15.06■□□□□ 0
ACTB-204ENST00000425660 WWP1Q9H0M0 922 aa15.06■□□□□ 0
ACTB-204ENST00000425660 ZDHHC3Q9NYG2 299 aa15.06■□□□□ 0
ACTB-204ENST00000425660 RAP2CQ9Y3L5 183 aa15.06■□□□□ 0
ACTB-204ENST00000425660 NUMBLQ9Y6R0 609 aa15.06■□□□□ 0
ACTB-204ENST00000425660 IQCF5A8MTL0 148 aa15.05■□□□□ -0
ACTB-204ENST00000425660 KPNA3O00505 521 aaPredicted RBP15.05■□□□□ -0
ACTB-204ENST00000425660 UBOX5O94941 541 aa15.05■□□□□ -0
ACTB-204ENST00000425660 CHRNGP07510 517 aa15.05■□□□□ -0
ACTB-204ENST00000425660 XPAP23025 273 aaPredicted RBP15.05■□□□□ -0
ACTB-204ENST00000425660 GALNT1Q10472 559 aaPredicted RBP15.05■□□□□ -0
ACTB-204ENST00000425660 GRIN2CQ14957 1233 aa15.05■□□□□ -0
ACTB-204ENST00000425660 HENMT1Q5T8I9 393 aaKnown RBP15.05■□□□□ -0
ACTB-204ENST00000425660 PRPF38BQ5VTL8 546 aaKnown RBP15.05■□□□□ -0
ACTB-204ENST00000425660 TECPR1Q7Z6L1 1165 aa15.05■□□□□ -0
ACTB-204ENST00000425660 SUGP1Q8IWZ8 645 aaKnown RBP15.05■□□□□ -0
ACTB-204ENST00000425660 LSMEM2Q8N112 164 aa15.05■□□□□ -0
ACTB-204ENST00000425660 ZNF781Q8N8C0 355 aa15.05■□□□□ -0
ACTB-204ENST00000425660 PIP4K2CQ8TBX8 421 aa15.05■□□□□ -0
ACTB-204ENST00000425660 ERP27Q96DN0 273 aa15.05■□□□□ -0
ACTB-204ENST00000425660 L3HYPDHQ96EM0 354 aa15.05■□□□□ -0
ACTB-204ENST00000425660 CNDP1Q96KN2 507 aa15.05■□□□□ -0
ACTB-204ENST00000425660 COPS8Q99627 209 aa15.05■□□□□ -0
ACTB-204ENST00000425660 ILKAPQ9H0C8 392 aaPredicted RBP15.05■□□□□ -0
ACTB-204ENST00000425660 FAM83DQ9H4H8 585 aa15.05■□□□□ -0
ACTB-204ENST00000425660 LATS2Q9NRM7 1088 aa15.05■□□□□ -0
ACTB-204ENST00000425660 PRSS21Q9Y6M0 314 aa15.05■□□□□ -0
ACTB-204ENST00000425660 AREL1O15033 823 aa15.04■□□□□ -0
ACTB-204ENST00000425660 NPC1O15118 1278 aa15.04■□□□□ -0
ACTB-204ENST00000425660 SPINT1O43278 529 aa15.04■□□□□ -0
ACTB-204ENST00000425660 APODP05090 189 aa15.04■□□□□ -0
ACTB-204ENST00000425660 TPBGLP0DKB5 382 aa15.04■□□□□ -0
ACTB-204ENST00000425660 IMPDH1P20839 514 aa15.04■□□□□ -0
ACTB-204ENST00000425660 B4GALNT1Q00973 533 aa15.04■□□□□ -0
ACTB-204ENST00000425660 PRKAA1Q13131 559 aa15.04■□□□□ -0
ACTB-204ENST00000425660 PTRHD1Q6GMV3 140 aaKnown RBP15.04■□□□□ -0
ACTB-204ENST00000425660 LIPIQ6XZB0 460 aa15.04■□□□□ -0
ACTB-204ENST00000425660 EP400NLQ6ZTU2 488 aa15.04■□□□□ -0
ACTB-204ENST00000425660 Q6ZVL8 140 aa15.04■□□□□ -0
ACTB-204ENST00000425660 MAVSQ7Z434 540 aa15.04■□□□□ -0
ACTB-204ENST00000425660 CLNKQ7Z7G1 428 aa15.04■□□□□ -0
ACTB-204ENST00000425660 DSG4Q86SJ6 1040 aa15.04■□□□□ -0
ACTB-204ENST00000425660 MTDHQ86UE4 582 aaKnown RBP15.04■□□□□ -0
ACTB-204ENST00000425660 CLDN19Q8N6F1 224 aa15.04■□□□□ -0
ACTB-204ENST00000425660 FUBP1Q96AE4 644 aaKnown RBP15.04■□□□□ -0
ACTB-204ENST00000425660 MOCOSQ96EN8 888 aa15.04■□□□□ -0
ACTB-204ENST00000425660 PPP1R16AQ96I34 528 aa15.04■□□□□ -0
ACTB-204ENST00000425660 MYLK2Q9H1R3 596 aa15.04■□□□□ -0
ACTB-204ENST00000425660 ACTR5Q9H9F9 607 aaPredicted RBP15.04■□□□□ -0
ACTB-204ENST00000425660 PNPOQ9NVS9 261 aa15.04■□□□□ -0
ACTB-204ENST00000425660 HEY2Q9UBP5 337 aa15.04■□□□□ -0
ACTB-204ENST00000425660 SUN2Q9UH99 717 aa15.04■□□□□ -0
ACTB-204ENST00000425660 TMPRSS11EQ9UL52 423 aa15.04■□□□□ -0
ACTB-204ENST00000425660 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.04■□□□□ -0
ACTB-204ENST00000425660 ANKRD65E5RJM6 399 aa15.03■□□□□ -0
ACTB-204ENST00000425660 SERPINB3P29508 390 aa15.03■□□□□ -0
ACTB-204ENST00000425660 ETV3P41162 512 aa15.03■□□□□ -0
ACTB-204ENST00000425660 METAP1P53582 386 aa15.03■□□□□ -0
ACTB-204ENST00000425660 CRY1Q16526 586 aa15.03■□□□□ -0
ACTB-204ENST00000425660 POM121L1PQ3SYA9 428 aa15.03■□□□□ -0
ACTB-204ENST00000425660 GPRC6AQ5T6X5 926 aa15.03■□□□□ -0
ACTB-204ENST00000425660 EGFLAMQ63HQ2 1017 aa15.03■□□□□ -0
ACTB-204ENST00000425660 FAM91A1Q658Y4 838 aa15.03■□□□□ -0
ACTB-204ENST00000425660 CPNE9Q8IYJ1 553 aa15.03■□□□□ -0
ACTB-204ENST00000425660 TRAM1L1Q8N609 369 aa15.03■□□□□ -0
ACTB-204ENST00000425660 EEF1AKMT1Q8WVE0 214 aa15.03■□□□□ -0
ACTB-204ENST00000425660 STON2Q8WXE9 905 aa15.03■□□□□ -0
ACTB-204ENST00000425660 INPP5DQ92835 1189 aa15.03■□□□□ -0
ACTB-204ENST00000425660 ARRDC3Q96B67 414 aa15.03■□□□□ -0
ACTB-204ENST00000425660 TRMOQ9BU70 441 aa15.03■□□□□ -0
ACTB-204ENST00000425660 ZSCAN5AQ9BUG6 496 aa15.03■□□□□ -0
ACTB-204ENST00000425660 FBRSL1Q9HCM7 1045 aaKnown RBP15.03■□□□□ -0
ACTB-204ENST00000425660 PRSS16Q9NQE7 514 aa15.03■□□□□ -0
ACTB-204ENST00000425660 DNAJC28Q9NX36 388 aa15.03■□□□□ -0
ACTB-204ENST00000425660 KLHL42Q9P2K6 505 aa15.03■□□□□ -0
ACTB-204ENST00000425660 IKZF3Q9UKT9 509 aa15.03■□□□□ -0
ACTB-204ENST00000425660 PRUNE2Q8WUY3 3088 aa15.03■□□□□ -0
ACTB-204ENST00000425660 TCF20Q9UGU0 1960 aaKnown RBP15.03■□□□□ -0
ACTB-204ENST00000425660 SYCE1LA8MT33 242 aa15.03■□□□□ -0
ACTB-204ENST00000425660 MATN2O00339 956 aa15.03■□□□□ -0
ACTB-204ENST00000425660 KLK8O60259 260 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms