RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 HDDC3Q8N4P3 179 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 ANKRD13CQ8N6S4 541 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 ARFGAP1Q8N6T3 406 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 CEP112Q8N8E3 955 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PDPRQ8NCN5 879 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 FAM156AQ8NDB6 213 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SRFBP1Q8NEF9 429 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 METTL6Q8TCB7 284 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 HTRA1Q92743 480 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SCAMP4Q969E2 229 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 RMND5BQ96G75 393 aaPredicted RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 MASTLQ96GX5 879 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PDLIM5Q96HC4 596 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 ZBED3Q96IU2 234 aaPredicted RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 FAM71F1Q96KD3 344 aaPredicted RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 ZSCAN31Q96LW9 406 aaPredicted RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 USP28Q96RU2 1077 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 TRIM15Q9C019 465 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SLC26A1Q9H2B4 701 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 EPS8L2Q9H6S3 715 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SLC38A10Q9HBR0 1119 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 DDX28Q9NUL7 540 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 FAIMQ9NVQ4 179 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 RMND1Q9NWS8 449 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 C5AR2Q9P296 337 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 CFAP97Q9P2B7 532 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 CNOT7Q9UIV1 285 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 PADI4Q9UM07 663 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 NAALADL1Q9UQQ1 740 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 ENTPD4Q9Y227 616 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 LRRC42Q9Y546 428 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PCDHGA8Q9Y5G5 932 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PCDHGA3Q9Y5H0 932 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 CFAP20Q9Y6A4 193 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 FAM169AQ9Y6X4 670 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 CCNB3Q8WWL7 1395 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 ADGRA2Q96PE1 1338 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PASKQ96RG2 1323 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 A0A0U1RQV5 110 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 LOC100506127A0A0U1RQW1 187 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 TMEM120BA0PK00 339 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 TMEM210A6NLX4 147 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 NT5C1B-RDH14C9J2C7 533 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 ANKRD65E5RJM6 399 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 E9PBE3 544 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PSMD11O00231 422 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 DNALI1O14645 258 aaPredicted RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 MAP2K7O14733 419 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 KCNN4O15554 427 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 KCNAB3O43448 404 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 TRIAP1O43715 76 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 MYO1DO94832 1006 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 LUC7L3O95232 432 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 MT-CO1P00395 513 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 CSTBP04080 98 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 CD1AP06126 327 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 RPS17P08708 135 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 CPA3P15088 417 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 GJA1P17302 382 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PDCP20941 246 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PSMA2P25787 234 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 NUP62P37198 522 aaPredicted RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 DPP6P42658 865 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PTGER3P43115 390 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 MAGEA11P43364 429 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SLC15A1P46059 708 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PRIM2P49643 509 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 CLCN5P51795 746 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SLC7A2P52569 658 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 AIF1P55008 147 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 ARL4CP56559 192 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SRP54P61011 504 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 ARF5P84085 180 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SCRN3Q0VDG4 424 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 CALCOCO2Q13137 446 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PPIL2Q13356 520 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 TUBB3Q13509 450 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SEMA5AQ13591 1074 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 POLD3Q15054 466 aaPredicted RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 CHRNA6Q15825 494 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PFKFB4Q16877 469 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 FAM98BQ52LJ0 330 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 TMEM31Q5JXX7 168 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 RARS2Q5T160 578 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 PLA2G4FQ68DD2 849 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 PTRHD1Q6GMV3 140 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 SNRNP48Q6IEG0 339 aaKnown RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 KIAA1161Q6NSJ0 714 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SCYL2Q6P3W7 929 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 MTFR2Q6P444 385 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SLC22A25Q6T423 547 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 TPGS1Q6ZTW0 290 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 MSANTD1Q6ZTZ1 278 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SLC24A5Q71RS6 500 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 TRPM8Q7Z2W7 1104 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 ZNF551Q7Z340 670 aaPredicted RBP2.88□□□□□ -1.95
PMS1-209ENST00000424059 RABEPKQ7Z6M1 372 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 THNSL1Q8IYQ7 743 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 SYCE1Q8N0S2 351 aa2.88□□□□□ -1.95
PMS1-209ENST00000424059 BBS5Q8N3I7 341 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms