RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 XRCC1P18887 633 aaPredicted RBP10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 DAOAP59103 153 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 HMGCS1Q01581 520 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 RIPK1Q13546 671 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 CCL14Q16627 93 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 RGS21Q2M5E4 152 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 PABPC1LQ4VXU2 614 aaKnown RBP10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 KLHL12Q53G59 568 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 CLDN19Q8N6F1 224 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 ZNF366Q8N895 744 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 NAT8LQ8N9F0 302 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 ZNF671Q8TAW3 534 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 OMA1Q96E52 524 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 OLFM1Q99784 485 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 NLNQ9BYT8 704 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 TMEM165Q9HC07 324 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 TRMT13Q9NUP7 481 aaKnown RBP10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 RBPJLQ9UBG7 517 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 SLC2A6Q9UGQ3 507 aa10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 PRPF19Q9UMS4 504 aaKnown RBP10.55□□□□□ -0.72
SEMA4D-208ENST00000422704 C5orf60A6NFR6 353 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 hCG_2039718K7EN88 272 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 VPS4BO75351 444 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 GOT2P00505 430 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 TSHRP16473 764 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 HOXB8P17481 243 aaPredicted RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 L1CAMP32004 1257 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 MTHFRP42898 656 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 NOVP48745 357 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 THOP1P52888 689 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 RAB14P61106 215 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 PITX1P78337 314 aaPredicted RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CLCQ05315 142 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CYP2A13Q16696 494 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 RNASE12Q5GAN4 147 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ZNF549Q6P9A3 640 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CYP20A1Q6UW02 462 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 PRSS55Q6UWB4 352 aaPredicted RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 EIF3MQ7L2H7 374 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CACTIN-AS1Q8N1I8 211 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 DBF4BQ8NFT6 615 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ANKRD49Q8WVL7 239 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 C10orf82Q8WW14 230 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 MTERF1Q99551 399 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 PTPN18Q99952 460 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 TMEM109Q9BVC6 243 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 OSBPL11Q9BXB4 747 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ZCCHC2Q9C0B9 1178 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 COQ10BQ9H8M1 238 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 TXNRD2Q9NNW7 524 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ARHGEF3Q9NR81 526 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CFAP97Q9P2B7 532 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 RAPGEFL1Q9UHV5 662 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 LGALS13Q9UHV8 139 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 GNPTGQ9UJJ9 305 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ARL5AQ9Y689 179 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 NOBOXO60393 691 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 GJA1P17302 382 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 RPL9P32969 192 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 SLC1A2P43004 574 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 SP3Q02447 781 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 SLC10A7Q0GE19 358 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 UBAP2Q5T6F2 1119 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 COMMD2Q86X83 199 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 FAM20CQ8IXL6 584 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 GPR65Q8IYL9 337 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 C12orf50Q8NA57 414 aaPredicted RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 OR10G6Q8NH81 332 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 BTN2A3PQ96KV6 586 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 TTPALQ9BTX7 342 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 MYH1P12882 1939 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 SMIM31A0A1B0GVY4 71 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 PRAMEF1O95521 474 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CLIC3O95833 236 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 HPCAL1P37235 193 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CYP4F8P98187 520 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 BLMHQ13867 455 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 KCNA10Q16322 511 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 USP41Q3LFD5 358 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ARL14EPQ8N8R7 260 aaPredicted RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CMASQ8NFW8 434 aaPredicted RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 FAM110BQ8TC76 370 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ZNF558Q96NG5 402 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 BTBD9Q96Q07 612 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CDK5RAP1Q96SZ6 601 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 WRAP53Q9BUR4 548 aaKnown RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 ENTPD4Q9Y227 616 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 GIT1Q9Y2X7 761 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 G3V2T6 193 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 GMFGO60234 142 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 CTSKP43235 329 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 GNPDA1P46926 289 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 PSEN1P49768 467 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 PTPN5P54829 565 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 KIAA0408Q6ZU52 694 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 USP50Q70EL3 339 aaPredicted RBP10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 AHSA2Q719I0 299 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 SLC34A3Q8N130 599 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 AMER2Q8N7J2 671 aa10.54□□□□□ -0.72
SEMA4D-208ENST00000422704 SIDT2Q8NBJ9 832 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms