RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 RTN3O95197 1032 aaPredicted RBP5.03□□□□□ -1.6
SFXN1-202ENST00000421887 GP1BAP07359 652 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 ADRB2P07550 413 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 ALPPL2P10696 532 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 RPS6KB1P23443 525 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 TNFRSF8P28908 595 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 ACOT2P49753 483 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 TUBP50607 506 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 RPS7P62081 194 aaKnown RBP5.03□□□□□ -1.6
SFXN1-202ENST00000421887 PSMC1P62191 440 aaKnown RBP5.03□□□□□ -1.6
SFXN1-202ENST00000421887 TRIM29Q14134 588 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 SHBQ15464 509 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 ISXQ2M1V0 245 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 KRTAP27-1Q3LI81 207 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 EARS2Q5JPH6 523 aaKnown RBP5.03□□□□□ -1.6
SFXN1-202ENST00000421887 MANEAQ5SRI9 462 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 FHL5Q5TD97 284 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 SFMBT2Q5VUG0 894 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 ADALQ6DHV7 355 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 CXorf57Q6NSI4 855 aaKnown RBP5.03□□□□□ -1.6
SFXN1-202ENST00000421887 KIAA1161Q6NSJ0 714 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 ANKS1BQ7Z6G8 1248 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 CLNKQ7Z7G1 428 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 FBXL16Q8N461 479 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 TMEM161BQ8NDZ6 487 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 WDR36Q8NI36 951 aaKnown RBP5.03□□□□□ -1.6
SFXN1-202ENST00000421887 OVCA2Q8WZ82 227 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 GOLGA1Q92805 767 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 MYLPFQ96A32 169 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 SERAC1Q96JX3 654 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 SYT15Q9BQS2 421 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 TTLL2Q9BWV7 592 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 RAB34Q9BZG1 259 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 TMEM140Q9NV12 185 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 LRWD1Q9UFC0 647 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 CHORDC1Q9UHD1 332 aaPredicted RBP5.03□□□□□ -1.6
SFXN1-202ENST00000421887 CPSF3Q9UKF6 684 aaKnown RBP5.03□□□□□ -1.6
SFXN1-202ENST00000421887 CDH9Q9ULB4 789 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 L1RE1Q9UN81 338 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 AGAP1Q9UPQ3 857 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 SLC27A6Q9Y2P4 619 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 PCDHGA8Q9Y5G5 932 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 LRRK2Q5S007 2527 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 DOCK9Q9BZ29 2069 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 A0A1B0GVM2 712 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 TCRBV7S2A1N4TA0A589 114 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 NEMP2A6NFY4 417 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 CDRT15L2A8MXV6 281 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 KCNU1A8MYU2 1149 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 E9PMD0 336 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 FFAR2O15552 330 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 RNASEH1O60930 286 aaKnown RBP5.02□□□□□ -1.61
SFXN1-202ENST00000421887 VPS4BO75351 444 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 URI1O94763 535 aaPredicted RBP5.02□□□□□ -1.61
SFXN1-202ENST00000421887 IL18RAPO95256 599 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 MT-CO1P00395 513 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 WNT1P04628 370 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 IGHV4-34P06331 123 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 CENPBP07199 599 aaPredicted RBP5.02□□□□□ -1.61
SFXN1-202ENST00000421887 ITGA2BP08514 1039 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 CISD3P0C7P0 127 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 CKMT1AP12532 417 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 SCP2P22307 547 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 PRKCHP24723 683 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 ABCD1P33897 745 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 CHKAP35790 457 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 ATP5C1P36542 298 aaKnown RBP5.02□□□□□ -1.61
SFXN1-202ENST00000421887 RXRGP48443 463 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 MFAP3P55082 362 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 NXPH1P58417 271 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 TFAMQ00059 246 aaKnown RBP5.02□□□□□ -1.61
SFXN1-202ENST00000421887 ENPP2Q13822 863 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 KRT79Q5XKE5 535 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 RINT1Q6NUQ1 792 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 FAM171BQ6P995 826 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 NCEH1Q6PIU2 408 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 RBM44Q6ZP01 1051 aaKnown RBP5.02□□□□□ -1.61
SFXN1-202ENST00000421887 SEM1Q6ZVN7 128 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 DAW1Q8N136 415 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 NUP93Q8N1F7 819 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 CSGALNACT2Q8N6G5 542 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 B3GALNT2Q8NCR0 500 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 SSC4DQ8WTU2 575 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 ZNF274Q96GC6 653 aaPredicted RBP5.02□□□□□ -1.61
SFXN1-202ENST00000421887 ATXN7L3BQ96GX2 97 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 PCED1BQ96HM7 432 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 AHCYL2Q96HN2 611 aaKnown RBP5.02□□□□□ -1.61
SFXN1-202ENST00000421887 PKMYT1Q99640 499 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 OMDQ99983 421 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 AGXT2Q9BYV1 514 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 ELOVL4Q9GZR5 314 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 EMC7Q9NPA0 242 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 ELOVL2Q9NXB9 296 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 FBXL12Q9NXK8 326 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 SCML1Q9UN30 329 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 VPS4AQ9UN37 437 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 SNX14Q9Y5W7 946 aa5.02□□□□□ -1.61
SFXN1-202ENST00000421887 USP9YO00507 2555 aaPredicted RBP5.02□□□□□ -1.61
SFXN1-202ENST00000421887 A0A0B4J269 797 aa5.01□□□□□ -1.61
SFXN1-202ENST00000421887 A1L4Q6 167 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms