RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 DDX39BQ13838 428 aaKnown RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 CPSF6Q16630 551 aaKnown RBP eCLIP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 PARP8Q8N3A8 854 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 PTCD2Q8WV60 388 aaKnown RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 MEAF6Q9HAF1 191 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 SUN2Q9UH99 717 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 SQORQ9Y6N5 450 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 B3GALT4O96024 378 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 PRLP01236 227 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 PKMP14618 531 aaKnown RBP13.23□□□□□ -0.29
MCF2L-213ENST00000421756 PRDX6P30041 224 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 CSKP41240 450 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 IST1P53990 364 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 PTGR1Q14914 329 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 OGFRL1Q5TC84 451 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-213ENST00000421756 AFMIDQ63HM1 303 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 PCYOX1LQ8NBM8 494 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 FUBP1Q96AE4 644 aaKnown RBP13.23□□□□□ -0.29
MCF2L-213ENST00000421756 CASD1Q96PB1 797 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 BEGAINQ9BUH8 593 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 LTB4R2Q9NPC1 389 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 C6orf203Q9P0P8 240 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-213ENST00000421756 VPS4AQ9UN37 437 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 POLR3HQ9Y535 204 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-213ENST00000421756 U3KQV3 271 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 ZNF840PA6NDX5 716 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 FAM58BPP0C7Q3 252 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 SELPP16109 830 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 ZNF23P17027 643 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 FDXRP22570 491 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 HK3P52790 923 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 LAPTM5Q13571 262 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 CCSAPQ6IQ19 270 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-213ENST00000421756 TMEM214Q6NUQ4 689 aaKnown RBP13.23□□□□□ -0.29
MCF2L-213ENST00000421756 UGT2A3Q6UWM9 527 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 RNF175Q8N4F7 328 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 LMNTD1Q8N9Z9 388 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 OR2T11Q8NH01 316 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 FBXL20Q96IG2 436 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 KLQ9UEF7 1012 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 BCAP29Q9UHQ4 241 aa13.23□□□□□ -0.29
MCF2L-213ENST00000421756 CHEK2O96017 543 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 NR4A1P22736 598 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 EEF1B2P24534 225 aaKnown RBP13.22□□□□□ -0.29
MCF2L-213ENST00000421756 NEK2P51955 445 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 HK2P52789 917 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 HSPA14Q0VDF9 509 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 GSTA3Q16772 222 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 TSPAN33Q86UF1 283 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 SLC15A3Q8IY34 581 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 FBXO30Q8TB52 745 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 FIG4Q92562 907 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 AURKBQ96GD4 344 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-213ENST00000421756 THUMPD3Q9BV44 507 aaKnown RBP13.22□□□□□ -0.29
MCF2L-213ENST00000421756 HMX1Q9NP08 348 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-213ENST00000421756 MIA3Q5JRA6 1907 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 PRAMEF1O95521 474 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 INHBEP58166 350 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 RPL38P63173 70 aaKnown RBP13.22□□□□□ -0.29
MCF2L-213ENST00000421756 MAPRE2Q15555 327 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 CACUL1Q86Y37 369 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 MFN1Q8IWA4 741 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 PELI3Q8N2H9 469 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 CPSF7Q8N684 471 aaKnown RBP13.22□□□□□ -0.29
MCF2L-213ENST00000421756 METTL25Q8N6Q8 603 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 PBXIP1Q96AQ6 731 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 SLCO4A1Q96BD0 722 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 ASB9Q96DX5 294 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 ATOH8Q96SQ7 321 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 ARNT2Q9HBZ2 717 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 CMTM6Q9NX76 183 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 OAZ3Q9UMX2 235 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 A0A0C4DFX4 3053 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 CCDC154A6NI56 674 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 HSPA8P11142 646 aaKnown RBP13.22□□□□□ -0.29
MCF2L-213ENST00000421756 HMOX2P30519 316 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 ARF5P84085 180 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 LAPTM4AQ15012 233 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 SAMD4BQ5PRF9 694 aaKnown RBP13.22□□□□□ -0.29
MCF2L-213ENST00000421756 CHSY3Q70JA7 882 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 LKAAEAR1Q8TD35 194 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 FEM1CQ96JP0 617 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 MTG2Q9H4K7 406 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 OLA1Q9NTK5 396 aaKnown RBP13.22□□□□□ -0.29
MCF2L-213ENST00000421756 CRLS1Q9UJA2 301 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 ZNF225Q9UK10 706 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 MED16Q9Y2X0 877 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 CPQQ9Y646 472 aa13.22□□□□□ -0.29
MCF2L-213ENST00000421756 TRIM24O15164 1050 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 SLC25A14O95258 325 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-213ENST00000421756 PYGLP06737 847 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 GPX3P22352 226 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 CASP9P55211 416 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 LCP2Q13094 533 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 CBLBQ13191 982 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 ANKS3Q6ZW76 656 aa13.21□□□□□ -0.29
MCF2L-213ENST00000421756 ADGRG2Q8IZP9 1017 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms