RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 GPR63Q9BZJ6 419 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 OR2AG1Q9H205 316 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 TRIM39Q9HCM9 518 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 SARS2Q9NP81 518 aaKnown RBP10.91□□□□□ -0.66
SSBP3-206ENST00000420121 SCHIP1Q9P0W5 487 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-206ENST00000420121 FAM153AQ9UHL3 310 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 EPN1Q9Y6I3 576 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-206ENST00000420121 DUSP10Q9Y6W6 482 aa10.91□□□□□ -0.66
SSBP3-206ENST00000420121 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-206ENST00000420121 F5H423 210 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-206ENST00000420121 ERVH48-1M5A8F1 160 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 GAPDHSO14556 408 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-206ENST00000420121 MTX2O75431 263 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 SLC25A14O95258 325 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-206ENST00000420121 NDUFA10O95299 355 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 EPOP01588 193 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 SLC4A1P02730 911 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 LIPCP11150 499 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 F3P13726 295 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 WT1P19544 449 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-206ENST00000420121 MPSTP25325 297 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 HMGCLP35914 325 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 MAPK10P53779 464 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 UBE2IP63279 158 aaKnown RBP10.9□□□□□ -0.66
SSBP3-206ENST00000420121 GPLD1P80108 840 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 RHDQ02161 417 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 HHEXQ03014 270 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 ATP13A5Q4VNC0 1218 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 ODF2Q5BJF6 829 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 SIRPB2Q5JXA9 342 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 KIAA1614Q5VZ46 1190 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 C11orf96Q7Z7L8 435 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 ZFAND4Q86XD8 727 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 GAS2L3Q86XJ1 694 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 BMPERQ8N8U9 685 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 HTR3CQ8WXA8 447 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 P3H4Q92791 437 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 PLEKHG4BQ96PX9 1271 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 PANX2Q96RD6 677 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 CCNL2Q96S94 520 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-206ENST00000420121 HEMGNQ9BXL5 484 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 SEMA4CQ9C0C4 833 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 B3GNT4Q9C0J1 378 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 LACRTQ9GZZ8 138 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 C10orf88Q9H8K7 445 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 BPIFA1Q9NP55 256 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 PRDM8Q9NQV8 689 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 KCNK4Q9NYG8 393 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 IL17CQ9P0M4 197 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 TENM4Q6N022 2769 aa10.9□□□□□ -0.66
SSBP3-206ENST00000420121 BOD1L1Q8NFC6 3051 aa10.9□□□□□ -0.67
SSBP3-206ENST00000420121 BSNQ9UPA5 3926 aa10.9□□□□□ -0.67
SSBP3-206ENST00000420121 BTNL10A8MVZ5 291 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 HACD1B0YJ81 288 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 GPR89AB7ZAQ6 455 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 APOC4-APOC2K7ER74 178 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 GPR39O43194 453 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 MTSS1O43312 755 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 APOC2P02655 101 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 GPR89BP0CG08 455 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 BRAFP15056 766 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 RBL1P28749 1068 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 CTNNA1P35221 906 aaKnown RBP10.89□□□□□ -0.67
SSBP3-206ENST00000420121 CYLC1P35663 651 aaPredicted RBP10.89□□□□□ -0.67
SSBP3-206ENST00000420121 XRCC4Q13426 336 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 TRA2AQ13595 282 aaKnown RBP eCLIP10.89□□□□□ -0.67
SSBP3-206ENST00000420121 SPA17Q15506 151 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 SLC1A5Q15758 541 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 AADACL2Q6P093 401 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 TMEM71Q6P5X7 295 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 CRTC3Q6UUV7 619 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 CCDC81Q6ZN84 652 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 ARHGAP22Q7Z5H3 698 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 DAAM2Q86T65 1068 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 PHYKPLQ8IUZ5 450 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 TMEM139Q8IV31 216 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 CCDC50Q8IVM0 306 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 ZNF843Q8N446 348 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 LRRC57Q8N9N7 239 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 DTX3LQ8TDB6 740 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 ALG3Q92685 438 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 WBP1Q96G27 269 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 RBM41Q96IZ5 413 aaKnown RBP10.89□□□□□ -0.67
SSBP3-206ENST00000420121 VPS35Q96QK1 796 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 VAT1Q99536 393 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 IL26Q9NPH9 171 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 RAD18Q9NS91 495 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 KLC4Q9NSK0 619 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 OCIAD1Q9NX40 245 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 OGFRQ9NZT2 677 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 KLHL8Q9P2G9 620 aaPredicted RBP10.89□□□□□ -0.67
SSBP3-206ENST00000420121 ZNF624Q9P2J8 865 aaPredicted RBP10.89□□□□□ -0.67
SSBP3-206ENST00000420121 PCDHGA3Q9Y5H0 932 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 PCDHA3Q9Y5H8 950 aa10.89□□□□□ -0.67
SSBP3-206ENST00000420121 TLN1Q9Y490 2541 aaKnown RBP10.88□□□□□ -0.67
SSBP3-206ENST00000420121 KIR2DS5A0A0G2JLQ3 304 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 A0A0G2JNG1 304 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 A0A0U1RQJ8 604 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 KIR2DS3K7RE56 304 aa10.88□□□□□ -0.67
SSBP3-206ENST00000420121 PJA2O43164 708 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms