RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 TRIM74Q86UV6 250 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 CCDC50Q8IVM0 306 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 RCOR2Q8IZ40 523 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 CBARPQ8N350 705 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 OR10G6Q8NH81 332 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 LRRN4Q8WUT4 740 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 HDAC11Q96DB2 347 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 RNF31Q96EP0 1072 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 SCARF2Q96GP6 870 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 CD84Q9UIB8 345 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 DNPEPQ9ULA0 475 aa13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 TMEM184BQ9Y519 407 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-202ENST00000415886 KCNK1O00180 336 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 PSMD11O00231 422 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 PSTPIP1O43586 416 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 NDUFA10O95299 355 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 DLGAP3O95886 979 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 TEAD1P28347 426 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 CETN2P41208 172 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 GPR1P46091 355 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 CD97P48960 835 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 HADHBP55084 474 aaKnown RBP13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 DSC2Q02487 901 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 PYCR3Q53H96 274 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 CCDC181Q5TID7 509 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 SLC9A4Q6AI14 798 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 RFLNAQ6ZTI6 216 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 ATCAYQ86WG3 371 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 TXLNBQ8N3L3 684 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 PLD5Q8N7P1 536 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 NCSTNQ92542 709 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 ADGRE3Q9BY15 652 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 KLHL3Q9UH77 587 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 CHKBQ9Y259 395 aa13.1□□□□□ -0.31
CTHRC1-202ENST00000415886 SPENQ96T58 3664 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 A0A0A6YYK5 440 aaPredicted RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 SOWAHDA6NJG2 315 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 PDHA1P08559 390 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 F8A1P23610 371 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 CD86P42081 329 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 STAT5AP42229 794 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 MAPK9P45984 424 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 UQCRFS1P47985 274 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 RPL26P61254 145 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 MC1RQ01726 317 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 HHEXQ03014 270 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 PPIDQ08752 370 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 NFATC2Q13469 925 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 WDR74Q6RFH5 385 aaPredicted RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 MFSD7Q6UXD7 560 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 TECPR1Q7Z6L1 1165 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 KIAA1328Q86T90 577 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 SFRP1Q8N474 314 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 LPCAT1Q8NF37 534 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 CCHCR1Q8TD31 782 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 PIH1D2Q8WWB5 315 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 P3H4Q92791 437 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 RBM41Q96IZ5 413 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 FERMT1Q9BQL6 677 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 ZPBPQ9BS86 351 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 TRIT1Q9H3H1 467 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 PCDH9Q9HC56 1237 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 FBXO8Q9NRD0 319 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 RPL26L1Q9UNX3 145 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 PCYT1BQ9Y5K3 369 aaPredicted RBP13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 KCNMB2Q9Y691 235 aa13.09□□□□□ -0.31
CTHRC1-202ENST00000415886 A0A0J9YYE9 177 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 C3orf70A6NLC5 250 aaPredicted RBP13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 CST8O60676 142 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 TRBC1P01850 177 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 HLA-DQB2P05538 268 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 PTMAP06454 111 aaKnown RBP13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 ZNF30P17039 623 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 DPTQ07507 201 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 LLGL1Q15334 1064 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 CRTC2Q53ET0 693 aaPredicted RBP13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 TFDP3Q5H9I0 405 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 NPNTQ6UXI9 565 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 ADAMTSL4Q6UY14 1074 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 SPOCD1Q6ZMY3 1216 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 NT5DC3Q86UY8 548 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 GAS2L3Q86XJ1 694 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 GALNT13Q8IUC8 556 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 TEX19Q8NA77 164 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 TFB1MQ8WVM0 346 aaKnown RBP13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 SCAMP4Q969E2 229 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 AP2M1Q96CW1 435 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 AGAP3Q96P47 875 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 SMIM14Q96QK8 99 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 MCCC1Q96RQ3 725 aaPredicted RBP13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 AGAP2Q99490 1192 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 MLPHQ9BV36 600 aaPredicted RBP13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 ABCG8Q9H221 673 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 IMPACTQ9P2X3 320 aa13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 PLEKHB1Q9UF11 243 aaPredicted RBP13.08□□□□□ -0.32
CTHRC1-202ENST00000415886 PPIL1Q9Y3C6 166 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms