RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 KCNC1P48547 511 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 PKNOX1P55347 436 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 CLCQ05315 142 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 FASTKQ14296 549 aaKnown RBP13.46□□□□□ -0.25
LIMS1-205ENST00000410093 UGT3A2Q3SY77 523 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
LIMS1-205ENST00000410093 PPM1LQ5SGD2 360 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 PSAPL1Q6NUJ1 521 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 SPATA19Q7Z5L4 167 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 GPSM1Q86YR5 675 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 APLFQ8IW19 511 aaPredicted RBP13.46□□□□□ -0.25
LIMS1-205ENST00000410093 PCDH20Q8N6Y1 951 aaKnown RBP13.46□□□□□ -0.25
LIMS1-205ENST00000410093 PCYOX1LQ8NBM8 494 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 GDPD5Q8WTR4 605 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 FUBP1Q96AE4 644 aaKnown RBP13.46□□□□□ -0.25
LIMS1-205ENST00000410093 ROPN1LQ96C74 230 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 SLC25A13Q9UJS0 675 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
LIMS1-205ENST00000410093 FCF1Q9Y324 198 aaKnown RBP13.46□□□□□ -0.25
LIMS1-205ENST00000410093 EPOPA6NHQ4 379 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 UBXN8O00124 270 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 ECI2O75521 394 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 CDK14O94921 469 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 S100BP04271 92 aaPredicted RBP13.45□□□□□ -0.26
LIMS1-205ENST00000410093 SNRPB2P08579 225 aaKnown RBP13.45□□□□□ -0.26
LIMS1-205ENST00000410093 POU2F2P09086 479 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 UROSP10746 265 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 PCSK2P16519 638 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 PTPN2P17706 415 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 CHRM3P20309 590 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 ME2P23368 584 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 POLR2LP62875 67 aaKnown RBP13.45□□□□□ -0.26
LIMS1-205ENST00000410093 LMAN2Q12907 356 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 AAK1Q2M2I8 961 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 PIGGQ5H8A4 983 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 CDKL4Q5MAI5 379 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 CTSL3PQ5NE16 218 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 OGFOD2Q6N063 350 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 PRMT9Q6P2P2 845 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 TAS2R42Q7RTR8 314 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 KBTBD6Q86V97 674 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 BBS7Q8IWZ6 715 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 PIANPQ8IYJ0 282 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 OR56A4Q8NGH8 313 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 CD200R1Q8TD46 325 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 DTX3LQ8TDB6 740 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
LIMS1-205ENST00000410093 ZNF483Q8TF39 744 aaPredicted RBP13.45□□□□□ -0.26
LIMS1-205ENST00000410093 AUTS2Q8WXX7 1259 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 CLPTM1LQ96KA5 538 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 C17orf80Q9BSJ5 609 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 OSBPL1AQ9BXW6 950 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 SLC2A11Q9BYW1 496 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 SHCBP1LQ9BZQ2 653 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 UNKQ9C0B0 810 aaKnown RBP13.45□□□□□ -0.26
LIMS1-205ENST00000410093 WDR41Q9HAD4 459 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 MID1IP1Q9NPA3 183 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 LATS2Q9NRM7 1088 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 NMRK1Q9NWW6 199 aa13.45□□□□□ -0.26
LIMS1-205ENST00000410093 C6orf203Q9P0P8 240 aaPredicted RBP13.45□□□□□ -0.26
LIMS1-205ENST00000410093 TMEM233B4DJY2 109 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 BTN3A1O00481 513 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 UBFD1O14562 309 aaKnown RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 PEX1O43933 1283 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 SKAP2O75563 359 aaPredicted RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CRCPO75575 148 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 MATN4O95460 622 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 ESRRBO95718 433 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 TSPAN12O95859 305 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 JUNP05412 331 aaKnown RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CBSLP0DN79 551 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 IDO1P14902 403 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 LBPP18428 481 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 DGKAP23743 735 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 EEF1DP29692 281 aaKnown RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CBSP35520 551 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 SPAM1P38567 509 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 VASPP50552 380 aaPredicted RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CLCN7P51798 805 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 SH3BP2P78314 561 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 ZXDBP98169 803 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 CYP4F8P98187 520 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 TRAP1Q12931 704 aaKnown RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 TSNQ15631 228 aaKnown RBP13.44□□□□□ -0.26
LIMS1-205ENST00000410093 TTLL9Q3SXZ7 439 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 MMEL1Q495T6 779 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 TJAP1Q5JTD0 557 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 ELMSAN1Q6PJG2 1045 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 MACC1Q6ZN28 852 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 TPRG1Q6ZUI0 275 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 USP45Q70EL2 814 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 LYSMD3Q7Z3D4 306 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 APCDD1Q8J025 514 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 KLHL23Q8NBE8 558 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 TWIST2Q8WVJ9 160 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 ULK4Q96C45 1275 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 RCN3Q96D15 328 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 LINGO1Q96FE5 620 aa13.44□□□□□ -0.26
LIMS1-205ENST00000410093 LMLNQ96KR4 655 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms