RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 VCLP18206 1134 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 XRCC1P18887 633 aaPredicted RBP14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 CTNNA2P26232 953 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 CD68P34810 354 aaPredicted RBP14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 VAV2P52735 878 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 EPHA4P54764 986 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 CXADRP78310 365 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 PDE1BQ01064 536 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 ADCY2Q08462 1091 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 VAC14Q08AM6 782 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 SLC1A5Q15758 541 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 AMZ1Q400G9 498 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 PHF19Q5T6S3 580 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 KDELC1Q6UW63 502 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 TRIM74Q86UV6 250 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 ZNF567Q8N184 647 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 BAG1Q99933 345 aaPredicted RBP14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 OSBPL8Q9BZF1 889 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 UCK1Q9HA47 277 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 ATXN10Q9UBB4 475 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 ATXN7L1Q9ULK2 861 aaPredicted RBP14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 PKP3Q9Y446 797 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 PCDHB11Q9Y5F2 797 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 ADGRG1Q9Y653 693 aa14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 DNMT3AQ9Y6K1 912 aaPredicted RBP14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 OAS3Q9Y6K5 1087 aaKnown RBP14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 ARHGEF17Q96PE2 2063 aaPredicted RBP14.37□□□□□ -0.11
NIF3L1-205ENST00000409588 KLHL33A6NCF5 533 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 SOWAHDA6NJG2 315 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 MIF4GDA9UHW6 222 aaKnown RBP14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 H7C0C1 242 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 ERVH48-1M5A8F1 160 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 ATXN7O15265 892 aaPredicted RBP14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 CDK14O94921 469 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 BPIP17213 487 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 NFKB1P19838 968 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 ATP5OP48047 213 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 GEMP55040 296 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 HHEXQ03014 270 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 KIF5AQ12840 1032 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 ITGA9Q13797 1035 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 PRPSAP1Q14558 356 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 NOMO1Q15155 1222 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 WASH2PQ6VEQ5 465 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 USP53Q70EK8 1073 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 LRRTM4Q86VH4 590 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 SFTPA2Q8IWL1 248 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 RBM12BQ8IXT5 1001 aaKnown RBP14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 UBL4BQ8N7F7 174 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 TTC13Q8NBP0 860 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 AGBL5Q8NDL9 886 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 SLC37A2Q8TED4 501 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 KRT35Q92764 455 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 NAF1Q96HR8 494 aaKnown RBP14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 MRGPRX2Q96LB1 330 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 TTC25Q96NG3 672 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 TAAR9Q96RI9 348 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 CCNL2Q96S94 520 aaPredicted RBP14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 TIMM29Q9BSF4 260 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 HEMGNQ9BXL5 484 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 FSD1LQ9BXM9 530 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 ASPSCR1Q9BZE9 553 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 ZCCHC2Q9C0B9 1178 aaKnown RBP14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 OR2AG1Q9H205 316 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 RDH14Q9HBH5 336 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 WASH6PQ9NQA3 447 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 UBP1Q9NZI7 540 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 TBC1D29Q9UFV1 150 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 FEZ2Q9UHY8 353 aaPredicted RBP14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 PLEKHM1Q9Y4G2 1056 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 PCDHGA3Q9Y5H0 932 aa14.36□□□□□ -0.11
NIF3L1-205ENST00000409588 IGHV5-10-1A0A0J9YXX1 117 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 A6NCN8 305 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 GOLGA6L9A6NEM1 432 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 C5orf60A6NFR6 353 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 K7ENP7 123 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 CASC3O15234 703 aaKnown RBP14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 DUX1O43812 170 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 PIRTP0C851 137 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 LIPCP11150 499 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 ACP5P13686 325 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 ZNF8P17098 575 aaPredicted RBP14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 CDC25BP30305 580 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 CSTF2P33240 577 aaKnown RBP eCLIP14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 TMEM115Q12893 351 aaPredicted RBP14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 SIRPB2Q5JXA9 342 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 LDLRAP1Q5SW96 308 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 INO80CQ6PI98 192 aaPredicted RBP14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 XKR5Q6UX68 686 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 ZNF574Q6ZN55 896 aaPredicted RBP14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 CCDC81Q6ZN84 652 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 ADGRG6Q86SQ4 1221 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 KIAA1328Q86T90 577 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 JAMLQ86YT9 394 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 CDKL3Q8IVW4 592 aaPredicted RBP14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 ZNF514Q96K75 400 aaPredicted RBP14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 SEMA6CQ9H3T2 930 aa14.35□□□□□ -0.11
NIF3L1-205ENST00000409588 GOLPH3Q9H4A6 298 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms