RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CA5AP35218 305 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 PTGIRP43119 386 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 RPIAP49247 311 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 TERF1P54274 439 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 TMEM115Q12893 351 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 ILKQ13418 452 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 PCID2Q5JVF3 399 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 ANKRD22Q5VYY1 191 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 SYDE1Q6ZW31 735 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 ZNF534Q76KX8 674 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 SNX20Q7Z614 316 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 SLC35F3Q8IY50 421 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 ARL10Q8N8L6 244 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 PNPLA1Q8N8W4 532 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 MCUQ8NE86 351 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 PEX13Q92968 403 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 ULK4Q96C45 1275 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 TTC25Q96NG3 672 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 TAAR2Q9P1P5 351 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 PLEKHM1Q9Y4G2 1056 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 SLC30A1Q9Y6M5 507 aa19.61■□□□□ 0.73
PDLIM2-207ENST00000409417 MYF5P13349 255 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 AK4P27144 223 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 MC4RP32245 332 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 DR1Q01658 176 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 PTK6Q13882 451 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 NR0B2Q15466 257 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 GPR33Q49SQ1 333 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 TSTD2Q5T7W7 516 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 OGFOD3Q6PK18 319 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 SLC30A9Q6PML9 568 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 PPHLN1Q8NEY8 458 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 OR13J1Q8NGT2 312 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 DPEP2Q9H4A9 486 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 SPATS2LQ9NUQ6 558 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 SIRPGQ9P1W8 387 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 ASIC3Q9UHC3 531 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 CRLS1Q9UJA2 301 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 CEP295Q9C0D2 2601 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 MED19A0JLT2 244 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 CCDC78A2IDD5 438 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 RFPL3O75679 317 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 ACTR1BP42025 376 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 ARSDP51689 593 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 ACTR1AP61163 376 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 ACVR1Q04771 509 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 GTF2H3Q13889 308 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 CCDC157Q569K6 752 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 CHST15Q7LFX5 561 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 ZNF547Q8IVP9 402 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 NXPE1Q8N323 547 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 ADAMTS14Q8WXS8 1223 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 XAB2Q9HCS7 855 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 CHRAC1Q9NRG0 131 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 GULP1Q9UBP9 304 aa19.6■□□□□ 0.73
PDLIM2-207ENST00000409417 TRBV5-4A0A0C4DH59 114 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 EME2A4GXA9 379 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 KMOO15229 486 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 TMEM63AO94886 807 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 TUBB4AP04350 444 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 GP1BAP07359 652 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 MLNP12872 115 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 ACP5P13686 325 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 MSH3P20585 1137 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 CRADDP78560 199 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 FOXK2Q01167 660 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 CACNG1Q06432 222 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 ZRANB3Q5FWF4 1079 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 ARMC3Q5W041 872 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 CRTC3Q6UUV7 619 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 LRRTM4Q86VH4 590 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 CAND1Q86VP6 1230 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 PPIL6Q8IXY8 311 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 RASGEF1AQ8N9B8 481 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 NAT8LQ8N9F0 302 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 KYQ8NBH2 561 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 SPATA4Q8NEY3 305 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 GPR156Q8NFN8 814 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 NAT6Q93015 286 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 ZNF514Q96K75 400 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 ZNF778Q96MU6 729 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 FAM96AQ9H5X1 160 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 SLC2A6Q9UGQ3 507 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 PADI4Q9UM07 663 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 KNTC1P50748 2209 aa19.59■□□□□ 0.73
PDLIM2-207ENST00000409417 ARHGEF17Q96PE2 2063 aaPredicted RBP19.58■□□□□ 0.73
PDLIM2-207ENST00000409417 NOBOXO60393 691 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 AVILO75366 819 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 MGAT1P26572 445 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 PMLP29590 882 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 AKT1P31749 480 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 DHX34Q14147 1143 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 RNASEH2BQ5TBB1 312 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 RAB44Q7Z6P3 723 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 JAMLQ86YT9 394 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 TRAPPC5Q8IUR0 188 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 HEXDCQ8WVB3 486 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 HDAC10Q969S8 669 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 KIFC1Q9BW19 673 aa19.58■□□□□ 0.72
PDLIM2-207ENST00000409417 ASXL3Q9C0F0 2248 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms