RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CACNA2D4Q7Z3S7 1137 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 LDB1Q86U70 411 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 IQCHQ86VS3 1027 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 CEP57Q86XR8 500 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 FAM217AQ8IXS0 508 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 SPATA6LQ8N4H0 392 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 CARNMT1Q8N4J0 409 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 RBM15BQ8NDT2 890 aaKnown RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 TEKT4Q8WW24 435 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 SLC25A28Q96A46 364 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 NUDCD1Q96RS6 583 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 NUP85Q9BW27 656 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 KCNK15Q9H427 330 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 WDR26Q9H7D7 661 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 ANKZF1Q9H8Y5 726 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 MAP6D1Q9H9H5 199 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 GPR108Q9NPR9 543 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 LARSQ9P2J5 1176 aaKnown RBP4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 HACL1Q9UJ83 578 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 LIPGQ9Y5X9 500 aa4.91□□□□□ -1.62
HMGB1P13-201ENST00000406019 KANSL1LA0AUZ9 987 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 CPED1A4D0V7 1026 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 TMEM8BA6NDV4 472 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 STMND1H3BQB6 276 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 DIAPH2O60879 1101 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 CREG1O75629 220 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 IFNA2P01563 188 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 CYC1P08574 325 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 CBSLP0DN79 551 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 CD58P19256 250 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 GPTP24298 496 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 CBSP35520 551 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 PPP3CCP48454 512 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 ALDH7A1P49419 539 aaKnown RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 RAD23BP54727 409 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 TMPRSS3P57727 454 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 RALGDSQ12967 914 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 TNIP1Q15025 636 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 SNAPC1Q16533 368 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 ATP13A5Q4VNC0 1218 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 DCAF6Q58WW2 860 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 MANEAQ5SRI9 462 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 C6orf10Q5SRN2 563 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 METTL2BQ6P1Q9 378 aaKnown RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 PIWIL3Q7Z3Z3 882 aaKnown RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 SDCCAG8Q86SQ7 713 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 PATL1Q86TB9 770 aaKnown RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 PIM3Q86V86 326 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 ZDHHC17Q8IUH5 632 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 MB21D2Q8IYB1 491 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 MAML2Q8IZL2 1156 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 MSANTD4Q8NCY6 345 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 SETD6Q8TBK2 473 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 GPT2Q8TD30 523 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 ADAMTS14Q8WXS8 1223 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 INPP5DQ92835 1189 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 ERGIC1Q969X5 290 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 METTL2AQ96IZ6 378 aaKnown RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 WDR77Q9BQA1 342 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 KRTAP1-5Q9BYS1 174 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 GOLPH3LQ9H4A5 285 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 CHCHD3Q9NX63 227 aaKnown RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 TRMT1Q9NXH9 659 aaKnown RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 MTRRQ9UBK8 725 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 OR14J1Q9UGF5 321 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 DDX25Q9UHL0 483 aaKnown RBP4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 ACSL5Q9ULC5 683 aa4.9□□□□□ -1.63
HMGB1P13-201ENST00000406019 TTC3P53804 2025 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 TRAV34A0A0B4J273 112 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 EDDM13A0A1B0GTR0 161 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 TRIM64A6NGJ6 449 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 TRIM64BA6NI03 449 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 MYMKA6NI61 221 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 H3BNX3 289 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 PSMA7O14818 248 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 WNT9BO14905 357 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 MDM4O15151 490 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 GOSR1O95249 250 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 TRUB2O95900 331 aaKnown RBP4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 GH2P01242 217 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 CRYABP02511 175 aaKnown RBP4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 CHRNB2P17787 502 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 DDX5P17844 614 aaKnown RBP4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 THBS3P49746 956 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 GRIK2Q13002 908 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 TUBB2AQ13885 445 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 DUSP6Q16828 381 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 MMEL1Q495T6 779 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 GGNBP1Q5YKI7 109 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 SIGIRRQ6IA17 410 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 TEX38Q6PEX7 206 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 SHQ1Q6PI26 577 aaKnown RBP4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 HAUS6Q7Z4H7 955 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 CAMK1DQ8IU85 385 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 CEP57L1Q8IYX8 460 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 NUP93Q8N1F7 819 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 CHCHD4Q8N4Q1 142 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 CAMKVQ8NCB2 501 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 TAS1R2Q8TE23 839 aa4.89□□□□□ -1.63
HMGB1P13-201ENST00000406019 MR1Q95460 341 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms