RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZNF460Q14592 562 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 POM121L1PQ3SYA9 428 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 LRRC8EQ6NSJ5 796 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 UGT3A1Q6NUS8 523 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 NRSN1Q8IZ57 195 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 NXPE1Q8N323 547 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 PNPLA1Q8N8W4 532 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 KCNJ9Q92806 393 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 ARRDC3Q96B67 414 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 SCYL1Q96KG9 808 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 ACOX2Q99424 681 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 IER2Q9BTL4 223 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 HDAC8Q9BY41 377 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 RABEP2Q9H5N1 569 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 COPG2Q9UBF2 871 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 GNPTGQ9UJJ9 305 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 WISP3O95389 354 aaPredicted RBP20.82■□□□□ 0.92
TPM1-208ENST00000404484 SP9P0CG40 484 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 CPA3P15088 417 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 SKIV2L2P42285 1042 aaKnown RBP20.82■□□□□ 0.92
TPM1-208ENST00000404484 KIR2DL1P43626 348 aaPredicted RBP20.82■□□□□ 0.92
TPM1-208ENST00000404484 PSMD8P48556 350 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 IRX4P78413 519 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 CSTF1Q05048 431 aaKnown RBP20.82■□□□□ 0.92
TPM1-208ENST00000404484 CCDC15Q0P6D6 951 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 GKAP1Q5VSY0 366 aaPredicted RBP20.82■□□□□ 0.92
TPM1-208ENST00000404484 TSSK4Q6SA08 328 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 ERN2Q76MJ5 926 aaKnown RBP20.82■□□□□ 0.92
TPM1-208ENST00000404484 MMAAQ8IVH4 418 aaKnown RBP20.82■□□□□ 0.92
TPM1-208ENST00000404484 PPP1R14CQ8TAE6 165 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 BIRC8Q96P09 236 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 PHOX2BQ99453 314 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 MRPL57Q9BQC6 102 aaKnown RBP20.82■□□□□ 0.92
TPM1-208ENST00000404484 PITPNM3Q9BZ71 974 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 FAM83DQ9H4H8 585 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 FGFR1OP2Q9NVK5 253 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 ZNF358Q9NW07 568 aa20.82■□□□□ 0.92
TPM1-208ENST00000404484 ADH1BP00325 375 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 ADRB3P13945 408 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 BGNP21810 368 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 NTSR1P30989 418 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 PRKAA2P54646 552 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 SATB1Q01826 763 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 STARD3Q14849 445 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 ZNF284Q2VY69 593 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 FBXO43Q4G163 708 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 LIPIQ6XZB0 460 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 NXNL1Q96CM4 212 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 UBXN10Q96LJ8 280 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 ZSCAN5AQ9BUG6 496 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 RSPH9Q9H1X1 276 aaPredicted RBP20.81■□□□□ 0.92
TPM1-208ENST00000404484 P2RY12Q9H244 342 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 MRPL46Q9H2W6 279 aaKnown RBP20.81■□□□□ 0.92
TPM1-208ENST00000404484 PRMT8Q9NR22 394 aaPredicted RBP20.81■□□□□ 0.92
TPM1-208ENST00000404484 ZDHHC3Q9NYG2 299 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 TRMT6Q9UJA5 497 aaKnown RBP20.81■□□□□ 0.92
TPM1-208ENST00000404484 FBXO4Q9UKT5 387 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 BPTFQ12830 3046 aa20.81■□□□□ 0.92
TPM1-208ENST00000404484 E5RI56 91 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 AREL1O15033 823 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 OR1I1O60431 355 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 H2AFYO75367 372 aaKnown RBP20.8■□□□□ 0.92
TPM1-208ENST00000404484 RBP1P09455 135 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 CCDC166P0CW27 439 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 MYL2P10916 166 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 TIE1P35590 1138 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 CXCL12P48061 93 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 CSHL1Q14406 222 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 PCLAFQ15004 111 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 ACAP2Q15057 778 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 HSD11B1LQ7Z5J1 315 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 FAM122AQ96E09 287 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 IGSF5Q9NSI5 407 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 SMOXQ9NWM0 555 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 OAS3Q9Y6K5 1087 aaKnown RBP20.8■□□□□ 0.92
TPM1-208ENST00000404484 PIEZO1Q92508 2521 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 NEMP1O14524 444 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 EDF1O60869 148 aaKnown RBP20.8■□□□□ 0.92
TPM1-208ENST00000404484 ZNF37AP17032 561 aaPredicted RBP20.8■□□□□ 0.92
TPM1-208ENST00000404484 UGT1A6P19224 532 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 UGT1A1P22309 533 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 UGT1A4P22310 534 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 GRK2P25098 689 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 ALDH3A1P30838 453 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 UGT1A3P35503 534 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 UGT1A5P35504 534 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 GMPRP36959 345 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 PLA2G5P39877 138 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 NSG1P42857 185 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 CCR3P51677 355 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 SEC13P55735 322 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 ASPHQ12797 758 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 CHI3L2Q15782 390 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 CTSL3PQ5NE16 218 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 PTRHD1Q6GMV3 140 aaKnown RBP20.8■□□□□ 0.92
TPM1-208ENST00000404484 ZYG11AQ6WRX3 759 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 ZNF771Q7L3S4 317 aaPredicted RBP20.8■□□□□ 0.92
TPM1-208ENST00000404484 CYP2U1Q7Z449 544 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 PIM3Q86V86 326 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 FSTL5Q8N475 847 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms