RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TMED6Q8WW62 240 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 LPGAT1Q92604 370 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 C3orf30Q96M34 536 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF48Q96MX3 618 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 MTERF1Q99551 399 aaKnown RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 GFI1Q99684 422 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 SH3GL2Q99962 352 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 SEMA3CQ99985 751 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 SLC25A33Q9BSK2 321 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 RTN4RQ9BZR6 473 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 SLCO5A1Q9H2Y9 848 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 SLC35C2Q9NQQ7 365 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 OCIAD1Q9NX40 245 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 BCCIPQ9P287 314 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 LARSQ9P2J5 1176 aaKnown RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 DBNLQ9UJU6 430 aaKnown RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 AGO1Q9UL18 857 aaKnown RBP3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 MYO6Q9UM54 1294 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF148Q9UQR1 794 aa3.85□□□□□ -1.79
HMGB1P17-201ENST00000403495 J3QR06 171 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 PLK4O00444 970 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 CREG1O75629 220 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 KDM4BO94953 1096 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 C22orf31O95567 290 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 HSPA4LO95757 839 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 CORO1AP31146 461 aaKnown RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 HOXD3P31249 432 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 MATR3P43243 847 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 PDLIM4P50479 330 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 ISL1P61371 349 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 COG7P83436 770 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 KRTAP1-1Q07627 177 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 Q0VFX4 171 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 SNTB1Q13884 538 aaKnown RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 BAATQ14032 418 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 MEP1AQ16819 746 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF260Q3ZCT1 412 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF628Q5EBL2 1059 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 C9orf152Q5JTZ5 239 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 KRBOX4Q5JUW0 171 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 C18orf63Q68DL7 685 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 HAUS6Q7Z4H7 955 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 GALNT13Q8IUC8 556 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 ODF3L1Q8IXM7 274 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 GUF1Q8N442 669 aaKnown RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 TDRD5Q8NAT2 981 aaKnown RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 OR5R1Q8NH85 324 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 TBC1D16Q8TBP0 767 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 UTP15Q8TED0 518 aaKnown RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 MRPS27Q92552 414 aaKnown RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 MOAP1Q96BY2 351 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 OLFM1Q99784 485 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 TMEM79Q9BSE2 394 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 OPA3Q9H6K4 179 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 WDR26Q9H7D7 661 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 C1RLQ9NZP8 487 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 MARCH4Q9P2E8 410 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 CRNNQ9UBG3 495 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 FBXL2Q9UKC9 423 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 LOXL2Q9Y4K0 774 aa3.84□□□□□ -1.79
HMGB1P17-201ENST00000403495 A0A0B4J293 547 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 TRBC2A0A5B9 178 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 MAGEB17A8MXT2 336 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 FAM90A26D6RGX4 464 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 HS3ST1O14792 307 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 ANKRD28O15084 1053 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZBTB43O43298 467 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 CSPG5O95196 566 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 CLDN14O95500 239 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 GH2P01242 217 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 DDX5P17844 614 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 FBLP22087 321 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 GABRA5P31644 462 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 ALCAMQ13740 583 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 PLCB4Q15147 1175 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 DECR1Q16698 335 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 KRTCAP3Q53RY4 240 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 TDRD12Q587J7 1177 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 FAM133BQ5BKY9 247 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 FRG2Q64ET8 278 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 LCN10Q6JVE6 187 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 PAPD4Q6PIY7 484 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 RHBDF2Q6PJF5 856 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 INTS8Q75QN2 995 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 CAMKMTQ7Z624 323 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 DNAJB7Q7Z6W7 309 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 VSIG1Q86XK7 387 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 CEP57Q86XR8 500 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 ZNF595Q8IYB9 648 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 HACE1Q8IYU2 909 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 EMC1Q8N766 993 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 CFAP61Q8NHU2 1237 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 TAS1R2Q8TE23 839 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 SLC38A5Q8WUX1 472 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 TAAR8Q969N4 342 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 SCMH1Q96GD3 660 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 SF3B5Q9BWJ5 86 aaKnown RBP3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 SPATC1LQ9H0A9 340 aa3.83□□□□□ -1.8
HMGB1P17-201ENST00000403495 SEMA6AQ9H2E6 1030 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms