RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 OSCP1Q8WVF1 389 aa9.11□□□□□ -0.95
HPS4-203ENST00000402105 KCTD13Q8WZ19 329 aa9.11□□□□□ -0.95
HPS4-203ENST00000402105 TMEM125Q96AQ2 219 aa9.11□□□□□ -0.95
HPS4-203ENST00000402105 HEPHQ9BQS7 1158 aa9.11□□□□□ -0.95
HPS4-203ENST00000402105 TREX1Q9NSU2 369 aa9.11□□□□□ -0.95
HPS4-203ENST00000402105 HACD3Q9P035 362 aa9.11□□□□□ -0.95
HPS4-203ENST00000402105 GTF2IRD1Q9UHL9 959 aa9.11□□□□□ -0.95
HPS4-203ENST00000402105 A0A1W2PQH9 124 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 DEAF1O75398 565 aaPredicted RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 DIRAS1O95057 198 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 NADKO95544 446 aaPredicted RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 FCGR1AP12314 374 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 IDO1P14902 403 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 CD1DP15813 335 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 FMO3P31513 532 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 NKX2-5P52952 324 aaPredicted RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 PLA2G16P53816 162 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 ARSFP54793 590 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 VBP1P61758 197 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 SEMA3AQ14563 771 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 MOGQ16653 247 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 FAM98BQ52LJ0 330 aaKnown RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 INTS11Q5TA45 600 aaKnown RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 PRMT9Q6P2P2 845 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 ENPP6Q6UWR7 440 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 FRA10AC1Q70Z53 315 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 PHACTR4Q8IZ21 702 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 ZCCHC7Q8N3Z6 543 aaKnown RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 ARL10Q8N8L6 244 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 CNIH3Q8TBE1 160 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 FRS2Q8WU20 508 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 TANKQ92844 425 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.1□□□□□ -0.95
HPS4-203ENST00000402105 FEM1AQ9BSK4 669 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 FUNDC2Q9BWH2 189 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 RIBC2Q9H4K1 309 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 ABCB10Q9NRK6 738 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 RASSF1Q9NS23 344 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 VPS4AQ9UN37 437 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 POLR3HQ9Y535 204 aaPredicted RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 ANGPTL3Q9Y5C1 460 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 PCDHB3Q9Y5E6 796 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 HS3ST4Q9Y661 456 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 SLC30A1Q9Y6M5 507 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 BRCA2P51587 3418 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 A0A1W2PP18 115 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 A8MX80 341 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 H0YJX3 145 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 ECI2O75521 394 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 MAP2K4P45985 399 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 LHX1P48742 406 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 PCYT1AP49585 367 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 GPR15P49685 360 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 CREB5Q02930 508 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 TIGD7Q6NT04 549 aaPredicted RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 BLOC1S3Q6QNY0 202 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 BNIPLQ7Z465 357 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 RAVER1Q8IY67 606 aaKnown RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 SIDT2Q8NBJ9 832 aaKnown RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 OR52B6Q8NGF0 335 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 IRGQQ8WZA9 623 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 ZUFSPQ96AP4 578 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 MCMBPQ9BTE3 642 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 YIPF2Q9BWQ6 316 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 MARCH7Q9H992 704 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 AFF4Q9UHB7 1163 aaKnown RBP9.1□□□□□ -0.95
HPS4-203ENST00000402105 ZNHIT2Q9UHR6 403 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 ADGRE2Q9UHX3 823 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 PCDHGA8Q9Y5G5 932 aa9.1□□□□□ -0.95
HPS4-203ENST00000402105 DNAJC25-GNG10A0A024R161 153 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 LINC00854A0A1B0GVQ3 168 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 BBIP1A8MTZ0 92 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 ARVCFO00192 962 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 NIPSNAP2O75323 286 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 CLPXO76031 633 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 ZNF682O95780 498 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 SNAI1O95863 264 aaPredicted RBP9.09□□□□□ -0.95
HPS4-203ENST00000402105 GPIP06744 558 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 PCSK1P29120 753 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 OR1E1P30953 314 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 ACVRL1P37023 503 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 LEPRP48357 1165 aaKnown RBP9.09□□□□□ -0.95
HPS4-203ENST00000402105 TTC3P53804 2025 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 ZNF549Q6P9A3 640 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 THAP5Q7Z6K1 395 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 LRRTM3Q86VH5 581 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 ANKRD46Q86W74 232 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 MFSD2AQ8NA29 543 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 AURKBQ96GD4 344 aaPredicted RBP9.09□□□□□ -0.95
HPS4-203ENST00000402105 NOL6Q9H6R4 1146 aaKnown RBP9.09□□□□□ -0.95
HPS4-203ENST00000402105 CATSPERZQ9NTU4 200 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 WDR70Q9NW82 654 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 LEF1Q9UJU2 399 aaPredicted RBP9.09□□□□□ -0.95
HPS4-203ENST00000402105 PSME2Q9UL46 239 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 ZNF232Q9UNY5 417 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 PCDHGA4Q9Y5G9 962 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 ZNF638Q14966 1978 aaKnown RBP9.09□□□□□ -0.95
HPS4-203ENST00000402105 A0A0G2JLL6 359 aaPredicted RBP9.09□□□□□ -0.95
HPS4-203ENST00000402105 KRBA1A5PL33 1030 aa9.09□□□□□ -0.95
HPS4-203ENST00000402105 OR1I1O60431 355 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms