RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 PPEF2O14830 753 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 GLRA2P23416 452 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 PEX2P28328 305 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 ACSL1P33121 698 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 AQP4P55087 323 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
CHD8-201ENST00000399982 SPP2Q13103 211 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 FOXRED2Q8IWF2 684 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 ZSWIM2Q8NEG5 633 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 C1orf216Q8TAB5 229 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 RELTQ969Z4 430 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 C16orf58Q96GQ5 468 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 MGME1Q9BQP7 344 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 TREM1Q9NP99 234 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 IL1RAPQ9NPH3 570 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 TAF6LQ9Y6J9 622 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 ZBTB14O43829 449 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 MATN4O95460 622 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 GNAO1P09471 354 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 TPSB2P20231 275 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 PPP3R1P63098 170 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 TPSAB1Q15661 275 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 TMEM119Q4V9L6 283 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 STXBP5Q5T5C0 1151 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 C6orf183Q5T699 404 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 NEPROQ6NW34 567 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 EFCAB12Q6NXP0 572 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 TREML1Q86YW5 311 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 ZNF717Q9BY31 904 aaPredicted RBP8.33□□□□□ -1.08
CHD8-201ENST00000399982 ELP3Q9H9T3 547 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 UCKL1Q9NWZ5 548 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 PCDHB12Q9Y5F1 795 aa8.33□□□□□ -1.08
CHD8-201ENST00000399982 CTSKP43235 329 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 TOB1P50616 345 aaPredicted RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 TXNL4AP83876 142 aaKnown RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 MAD2L1BPQ15013 274 aaPredicted RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 GRHL2Q6ISB3 625 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 SLC30A6Q6NXT4 461 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 QSOX2Q6ZRP7 698 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 SLC9A9Q8IVB4 645 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 PHC2Q8IXK0 858 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 NRSN1Q8IZ57 195 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 CBR4Q8N4T8 237 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 ZNF557Q8N988 423 aaPredicted RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 GOLM1Q8NBJ4 401 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 TMEM176AQ96HP8 235 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 SH2D3AQ9BRG2 576 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 FNDC11Q9BVV2 318 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 QTRT2Q9H974 415 aaKnown RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 FBXO6Q9NRD1 293 aaPredicted RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 FAM53CQ9NYF3 392 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 GRHL1Q9NZI5 618 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 RGS17Q9UGC6 210 aaPredicted RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 NARFQ9UHQ1 456 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 PCDHGB5Q9Y5G0 923 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 ZNF335Q9H4Z2 1342 aaPredicted RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 EFCAB6Q5THR3 1501 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 FADS2P1A8MWK0 482 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 H3BUI4 141 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 KDELR1P24390 212 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 MTHFRP42898 656 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 SLC26A2P50443 739 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 PCDH1Q08174 1060 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 GPR180Q86V85 440 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 OR2L2Q8NH16 312 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 C1GALT1C1Q96EU7 318 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 LIN37Q96GY3 246 aaPredicted RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 CEP295NLQ96MC4 621 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 CDHR5Q9HBB8 845 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 POMPQ9Y244 141 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 PCDHGB1Q9Y5G3 927 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 PIGBOS1A0A0B4J2F0 54 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 CLCA1A8K7I4 914 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 PLD2O14939 933 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 HBP1O60381 514 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 OR10H3O60404 316 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 PEX11AO75192 247 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 FADS2O95864 444 aaKnown RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 MGAT1P26572 445 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 SREBF1P36956 1147 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 CPT1AP50416 773 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 MARC1Q5VT66 337 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 NOTUMQ6P988 496 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 HAGHLQ6PII5 290 aaPredicted RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 KIAA1324Q6UXG2 1013 aaKnown RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 GPRIN3Q6ZVF9 776 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 LDHDQ86WU2 507 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 MASTLQ96GX5 879 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 DUSP9Q99956 384 aaKnown RBP8.32□□□□□ -1.08
CHD8-201ENST00000399982 HEPHQ9BQS7 1158 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 ERVK-18Q9QC07 812 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 DNAJB9Q9UBS3 223 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 SIGLEC16A6NMB1 481 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 CALCAP01258 141 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 EPCAMP16422 314 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 PBX1P40424 430 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 VLDLRP98155 873 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 POU6F1Q14863 301 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 TEAD4Q15561 434 aa8.32□□□□□ -1.08
CHD8-201ENST00000399982 COLEC12Q5KU26 742 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms