RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 PIK3C3Q8NEB9 887 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 BPIFB1Q8TDL5 484 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 SLC5A11Q8WWX8 675 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 RNFT2Q96EX2 444 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 ZNF285Q96NJ3 590 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 ABCG8Q9H221 673 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 GMPR2Q9P2T1 348 aaKnown RBP13.66□□□□□ -0.22
RUNX3-203ENST00000399916 DUX4Q9UBX2 424 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 REV1Q9UBZ9 1251 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 IKZF3Q9UKT9 509 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 CLEC4AQ9UMR7 237 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 RPS7P62081 194 aaKnown RBP13.66□□□□□ -0.22
RUNX3-203ENST00000399916 DSG2Q14126 1118 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 NR6A1Q15406 480 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 ZNF568Q3ZCX4 644 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 PIGGQ5H8A4 983 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 SLC39A4Q6P5W5 647 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 C11orf88Q6PI97 169 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 NOXA1Q86UR1 476 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 NLGN2Q8NFZ4 835 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 SPPL2AQ8TCT8 520 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 NAT9Q9BTE0 207 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 BEX1Q9HBH7 125 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 TJP2Q9UDY2 1190 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 LAMB1P07942 1786 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 TRIM64A6NGJ6 449 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 TRIM64BA6NI03 449 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 KATNA1O75449 491 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 SULT1C4O75897 302 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 MYL9P24844 172 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 PTP4A2Q12974 167 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 SPP2Q13103 211 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 PCLAFQ15004 111 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 SWI5Q1ZZU3 235 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 ZNF470Q6ECI4 717 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 IFNL1Q8IU54 200 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 ZNF431Q8TF32 576 aaPredicted RBP13.66□□□□□ -0.22
RUNX3-203ENST00000399916 RPL3LQ92901 407 aaKnown RBP13.66□□□□□ -0.22
RUNX3-203ENST00000399916 REXO5Q96IC2 774 aaKnown RBP13.66□□□□□ -0.22
RUNX3-203ENST00000399916 FRMD6Q96NE9 622 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 TMEM74Q96NL1 305 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 AGAP4Q96P64 663 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 AGAP2Q99490 1192 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 KLHL31Q9H511 634 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 NFKBIL1Q9UBC1 381 aaPredicted RBP13.66□□□□□ -0.22
RUNX3-203ENST00000399916 AFF4Q9UHB7 1163 aaKnown RBP13.66□□□□□ -0.22
RUNX3-203ENST00000399916 PFDN2Q9UHV9 154 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 ATRNL1Q5VV63 1379 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 UBL4AP11441 157 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 DAG1Q14118 895 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 RFX4Q33E94 735 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 CYP27C1Q4G0S4 372 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 STRIP1Q5VSL9 837 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 EPGNQ6UW88 154 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 HID1Q8IV36 788 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 MICALL2Q8IY33 904 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 FAM83FQ8NEG4 500 aaPredicted RBP13.66□□□□□ -0.22
RUNX3-203ENST00000399916 CENPIQ92674 756 aaPredicted RBP13.66□□□□□ -0.22
RUNX3-203ENST00000399916 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 SLAMF7Q9NQ25 335 aa13.66□□□□□ -0.22
RUNX3-203ENST00000399916 FABP12A6NFH5 140 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 H7C2Y5 167 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 ARPC2O15144 300 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 HOXC11O43248 304 aaPredicted RBP13.65□□□□□ -0.22
RUNX3-203ENST00000399916 CST3P01034 146 aaPredicted RBP13.65□□□□□ -0.22
RUNX3-203ENST00000399916 NNMTP40261 264 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 ATP12AP54707 1039 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 DSTNP60981 165 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 SEMA5AQ13591 1074 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 GALEQ14376 348 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 EMC2Q15006 297 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 FAM92BQ6ZTR7 304 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 BTN2A1Q7KYR7 527 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 SNX20Q7Z614 316 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 RIOX2Q8IUF8 465 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 ITCHQ96J02 903 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 PPP1R2P1Q96PQ5 205 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 NRBP2Q9NSY0 501 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 ERVK-18Q9QC07 812 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 ADGRE2Q9UHX3 823 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 MAGED1Q9Y5V3 778 aaPredicted RBP13.65□□□□□ -0.22
RUNX3-203ENST00000399916 NR3C2P08235 984 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 VDRP11473 427 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 ADORA2AP29274 412 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 WSCD2Q2TBF2 565 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 RELL1Q8IUW5 271 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 TRPV3Q8NET8 790 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 VPS37AQ8NEZ2 397 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 BRSK1Q8TDC3 778 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 HTR3CQ8WXA8 447 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 TFAP2CQ92754 450 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 ZNF597Q96LX8 424 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 SEZ6LQ9BYH1 1024 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 MCCC2Q9HCC0 563 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 RNF146Q9NTX7 359 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 FZD1Q9UP38 647 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 INVSQ9Y283 1065 aa13.65□□□□□ -0.22
RUNX3-203ENST00000399916 PSAT1Q9Y617 370 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms