RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TPSAB1Q15661 275 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 GPRC6AQ5T6X5 926 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 CRTC3Q6UUV7 619 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 NLRP9Q7RTR0 991 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 TAS2R42Q7RTR8 314 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 EFL1Q7Z2Z2 1120 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 LRRTM4Q86VH4 590 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 NRROSQ86YC3 692 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 IFI44Q8TCB0 444 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 ZDHHC1Q8WTX9 485 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 ULK4Q96C45 1275 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 DCUN1D1Q96GG9 259 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 RUNDC3BQ96NL0 473 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 SPATS2LQ9NUQ6 558 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 MYLKQ15746 1914 aa25.07■■□□□ 1.6
TSPAN4-207ENST00000397411 GAPDHSO14556 408 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 KMOO15229 486 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 HYAL3O43820 417 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 XIAPP98170 497 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 NFATC2Q13469 925 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 INSCQ1MX18 579 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 SNX20Q7Z614 316 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 TRAPPC5Q8IUR0 188 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 KYQ8NBH2 561 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 NAT6Q93015 286 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 CDKN2AIPNLQ96HQ2 116 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 RANBP9Q96S59 729 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 ASIC3Q9UHC3 531 aa25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 ARHGEF17Q96PE2 2063 aaPredicted RBP25.06■■□□□ 1.6
TSPAN4-207ENST00000397411 MROH6A6NGR9 719 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 CCDC188H7C350 402 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 GPR39O43194 453 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 RALBP11234 206 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 PMLP29590 882 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 PLA2G4EQ3MJ16 856 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 PCID2Q5JVF3 399 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 GUSBP11Q6P575 273 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 LRRC8BQ6P9F7 803 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 OGFOD3Q6PK18 319 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 RAB44Q7Z6P3 723 aaPredicted RBP25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 DDHD1Q8NEL9 900 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 OR6C4Q8NGE1 309 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 ANGPTL2Q9UKU9 493 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 KCNK6Q9Y257 313 aa25.05■■□□□ 1.6
TSPAN4-207ENST00000397411 LY6G6EA0A0G2JKS1 128 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 EME2A4GXA9 379 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 SNX2O60749 519 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 TOP3BO95985 862 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 GPR33Q49SQ1 333 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 KHDC1Q4VXA5 237 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 TSTD2Q5T7W7 516 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 GALNT15Q8N3T1 639 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 MAPK15Q8TD08 544 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 IL22Q9GZX6 179 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 OSGEPL1Q9H4B0 414 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 KLC4Q9NSK0 619 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 SMOXQ9NWM0 555 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 PCYOX1Q9UHG3 505 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 NEU2Q9Y3R4 380 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 TCAF1Q9Y4C2 921 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 PCYT1BQ9Y5K3 369 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 U3KQA8 63 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 DNAH14Q0VDD8 3507 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 DCHS1Q96JQ0 3298 aa25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 ZFC3H1O60293 1989 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-207ENST00000397411 TCRBV7S3A2A0A539 114 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 CHUKO15111 745 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 GP1BAP07359 652 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 ZNF7P17097 686 aaPredicted RBP25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 VCLP18206 1134 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 CACNG1Q06432 222 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 KCNJ11Q14654 390 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 C14orf28Q4W4Y0 310 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 TMEM220Q6QAJ8 160 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 DET1Q7L5Y6 550 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 GPR156Q8NFN8 814 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 OR6P1Q8NGX9 317 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 HEXDCQ8WVB3 486 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.03■■□□□ 1.63e-8■■■■□ 21.6
TSPAN4-207ENST00000397411 C16orf45Q96MC5 204 aaPredicted RBP25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 SCNM1Q9BWG6 230 aa25.03■■□□□ 1.6
TSPAN4-207ENST00000397411 ZNF106Q9H2Y7 1883 aaKnown RBP25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 TRBV23OR9-2A0A075B6M9 112 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 CFAP99D6REC4 459 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 H7C0S8 307 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 FANCGO15287 622 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 DKK1O94907 266 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 JUPP14923 745 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 SPINK2P20155 84 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 MGAT1P26572 445 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 CA5AP35218 305 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 PRAMEP78395 509 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 DR1Q01658 176 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 NXPE1Q8N323 547 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 RASGEF1AQ8N9B8 481 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 CPT1BQ92523 772 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 HDAC10Q969S8 669 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 ZNF514Q96K75 400 aaPredicted RBP25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 TTC1Q99614 292 aa25.02■■□□□ 1.6
TSPAN4-207ENST00000397411 COPS8Q99627 209 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms