RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 NOMO1Q15155 1222 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 SLC1A5Q15758 541 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 INSCQ1MX18 579 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 DARS2Q6PI48 645 aaKnown RBP13.59□□□□□ -0.23
CXCL12-205ENST00000395794 KDELC1Q6UW63 502 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 PEX26Q7Z412 305 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 GLT6D1Q7Z4J2 308 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 SLITRK4Q8IW52 837 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 SFRP1Q8N474 314 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 ACRBPQ8NEB7 543 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 CCDC112Q8NEF3 446 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 BLOC1S5Q8TDH9 187 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 SLC37A2Q8TED4 501 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 PPP1R2P1Q96PQ5 205 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 NUDT22Q9BRQ3 303 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-205ENST00000395794 LACRTQ9GZZ8 138 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 OSGEPL1Q9H4B0 414 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 BPIFA1Q9NP55 256 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 ARFGAP3Q9NP61 516 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 TBC1D29Q9UFV1 150 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 AMFRQ9UKV5 643 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 AAR2Q9Y312 384 aaKnown RBP13.59□□□□□ -0.23
CXCL12-205ENST00000395794 PKP3Q9Y446 797 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 ASXL3Q9C0F0 2248 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 IGHV1OR21-1A0A087WYE8 117 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 KIR2DS5A0A0G2JLQ3 304 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 A0A0G2JNG1 304 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 KIR2DS3K7RE56 304 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 HGSO14964 777 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-205ENST00000395794 AURKAO14965 403 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 KMOO15229 486 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 NVLO15381 856 aaKnown RBP13.58□□□□□ -0.24
CXCL12-205ENST00000395794 PJA2O43164 708 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 DUX1O43812 170 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 PPFIA2O75334 1257 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 CDK14O94921 469 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 RBP3P10745 1247 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 F3P13726 295 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 VCLP18206 1134 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 SPAM1P38567 509 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 MAPK10P53779 464 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 OTUD4Q01804 1114 aaKnown RBP13.58□□□□□ -0.24
CXCL12-205ENST00000395794 NFATC2Q13469 925 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.24
CXCL12-205ENST00000395794 KIR2DS5Q14953 304 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 ZNF648Q5T619 568 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-205ENST00000395794 NKAIN2Q5VXU1 208 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 IYDQ6PHW0 289 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 CRTC3Q6UUV7 619 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 ADGRG6Q86SQ4 1221 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 LRRTM4Q86VH4 590 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 OR4D9Q8NGE8 314 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 ACTL9Q8TC94 416 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 BRSK1Q8TDC3 778 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 OXNAD1Q96HP4 312 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-205ENST00000395794 MRGPRX2Q96LB1 330 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 VPS35Q96QK1 796 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 ZCCHC2Q9C0B9 1178 aaKnown RBP13.58□□□□□ -0.24
CXCL12-205ENST00000395794 GBA3Q9H227 469 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 SARS2Q9NP81 518 aaKnown RBP13.58□□□□□ -0.24
CXCL12-205ENST00000395794 KLC4Q9NSK0 619 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 REXO2Q9Y3B8 237 aaKnown RBP13.58□□□□□ -0.24
CXCL12-205ENST00000395794 PCDHB11Q9Y5F2 797 aa13.58□□□□□ -0.24
CXCL12-205ENST00000395794 CELSR3Q9NYQ7 3312 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 IGHV5-10-1A0A0J9YXX1 117 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 GRID2IPA4D2P6 1211 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 C2orf81A6NN90 581 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 MIF4GDA9UHW6 222 aaKnown RBP13.57□□□□□ -0.24
CXCL12-205ENST00000395794 KCNN4O15554 427 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 ITIH1P19827 911 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 CSTF2P33240 577 aaKnown RBP eCLIP13.57□□□□□ -0.24
CXCL12-205ENST00000395794 CHRNA4P43681 627 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 LIMK2P53671 638 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 VAC14Q08AM6 782 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 SQSTM1Q13501 440 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 SOWAHCQ53LP3 525 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-205ENST00000395794 ARHGAP40Q5TG30 622 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 TMEM71Q6P5X7 295 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 CCDC81Q6ZN84 652 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 TMPRSS9Q7Z410 1059 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 TRIM48Q8IWZ4 208 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 TTC13Q8NBP0 860 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 SPC24Q8NBT2 197 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 AGBL5Q8NDL9 886 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 CCDC74BQ96LY2 380 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 C10orf88Q9H8K7 445 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 CPNE5Q9HCH3 593 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 IL26Q9NPH9 171 aa13.57□□□□□ -0.24
CXCL12-205ENST00000395794 PCYT1BQ9Y5K3 369 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-205ENST00000395794 RP1P56715 2156 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 GLYATL1P3A0A0U1RQE8 302 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 PDZK1P1A8MUH7 402 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 CHUKO15111 745 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 STX7O15400 261 aaKnown RBP13.56□□□□□ -0.24
CXCL12-205ENST00000395794 MTX2O75431 263 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 EML2O95834 649 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 AGTP01019 485 aa13.56□□□□□ -0.24
CXCL12-205ENST00000395794 PYGMP11217 842 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms