RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RNF111Q6ZNA4 994 aa14.94□□□□□ -0.02
GPC3-202ENST00000394299 CHSY3Q70JA7 882 aa14.94□□□□□ -0.02
GPC3-202ENST00000394299 LARP4Q71RC2 724 aaKnown RBP eCLIP14.94□□□□□ -0.021e-323■■□□□ 12.5
GPC3-202ENST00000394299 RAB44Q7Z6P3 723 aaPredicted RBP14.94□□□□□ -0.02
GPC3-202ENST00000394299 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.94□□□□□ -0.027e-6■■■■□ 20.7
GPC3-202ENST00000394299 CLYBLQ8N0X4 340 aa14.94□□□□□ -0.02
GPC3-202ENST00000394299 KYQ8NBH2 561 aa14.94□□□□□ -0.02
GPC3-202ENST00000394299 CHST14Q8NCH0 376 aa14.94□□□□□ -0.02
GPC3-202ENST00000394299 BBS2Q9BXC9 721 aa14.94□□□□□ -0.02
GPC3-202ENST00000394299 CIPCQ9C0C6 399 aa14.94□□□□□ -0.02
GPC3-202ENST00000394299 AKTIPQ9H8T0 292 aa14.94□□□□□ -0.02
GPC3-202ENST00000394299 C9JVG2 144 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 PIP5K1BO14986 540 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 IGSF6O95976 241 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 CYBBP04839 570 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 ALDOCP09972 364 aaKnown RBP14.93□□□□□ -0.02
GPC3-202ENST00000394299 LINC00032P0C843 101 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 EN2P19622 333 aaPredicted RBP14.93□□□□□ -0.02
GPC3-202ENST00000394299 GRB7Q14451 532 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 TAF11Q15544 211 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 MYLK3Q32MK0 819 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 AGKQ53H12 422 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 C6orf163Q5TEZ5 329 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 PAOXQ6QHF9 649 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 DPY19L3Q6ZPD9 716 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 NKAPQ8N5F7 415 aaKnown RBP14.93□□□□□ -0.02
GPC3-202ENST00000394299 GPR26Q8NDV2 337 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 SLC26A7Q8TE54 656 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 C19orf60Q96EN9 201 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 PLEKHG4BQ96PX9 1271 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 RAD9AQ99638 391 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 MTG2Q9H4K7 406 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 ZDHHC6Q9H6R6 413 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 ATP13A3Q9H7F0 1226 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 NMRK1Q9NWW6 199 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 ZNF225Q9UK10 706 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 PRMT5O14744 637 aaPredicted RBP14.93□□□□□ -0.02
GPC3-202ENST00000394299 TRIM16O95361 564 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 PENKP01210 267 aaPredicted RBP14.93□□□□□ -0.02
GPC3-202ENST00000394299 ANPEPP15144 967 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 ATP6V0D1P61421 351 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 NFATC2Q13469 925 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 TMEM215Q68D42 235 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 TRIM68Q6AZZ1 485 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 CRTC1Q6UUV9 634 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 Q6ZVU0 165 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 RBM23Q86U06 439 aaKnown RBP14.93□□□□□ -0.02
GPC3-202ENST00000394299 DDIASQ8IXT1 998 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 PCDH20Q8N6Y1 951 aaKnown RBP14.93□□□□□ -0.02
GPC3-202ENST00000394299 FAM156AQ8NDB6 213 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 KCNJ9Q92806 393 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 FAR2Q96K12 515 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 CDK15Q96Q40 435 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 TRMOQ9BU70 441 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 TDP1Q9NUW8 608 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 STOML1Q9UBI4 398 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 WNT6Q9Y6F9 365 aa14.93□□□□□ -0.02
GPC3-202ENST00000394299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.92□□□□□ -0.02
GPC3-202ENST00000394299 AZIN1O14977 448 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 GRM6O15303 877 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 ESR1P03372 595 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 UGT2B4P06133 528 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 CHRM1P11229 460 aaPredicted RBP14.92□□□□□ -0.02
GPC3-202ENST00000394299 LBX1P52954 281 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 INHBCP55103 352 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 MTTPP55157 894 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 FPGSQ05932 587 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 LY6G5CQ5SRR4 150 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 PTRHD1Q6GMV3 140 aaKnown RBP14.92□□□□□ -0.02
GPC3-202ENST00000394299 LRRC74BQ6ZQY2 392 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 GRASPQ7Z6J2 395 aaPredicted RBP14.92□□□□□ -0.02
GPC3-202ENST00000394299 TWIST2Q8WVJ9 160 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 CD274Q9NZQ7 290 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 EIF2B4Q9UI10 523 aaKnown RBP14.92□□□□□ -0.02
GPC3-202ENST00000394299 LRRC42Q9Y546 428 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 IRAK3Q9Y616 596 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 SZT2Q5T011 3432 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 FBP2O00757 339 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 TYRP14679 529 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 PTPN2P17706 415 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 TCN1P20061 433 aaPredicted RBP14.92□□□□□ -0.02
GPC3-202ENST00000394299 CCNHP51946 323 aaPredicted RBP14.92□□□□□ -0.02
GPC3-202ENST00000394299 THOP1P52888 689 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 SATB1Q01826 763 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 CEACAM7Q14002 265 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 FASTKQ14296 549 aaKnown RBP14.92□□□□□ -0.02
GPC3-202ENST00000394299 ANKS6Q68DC2 871 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 C22orf39Q6P5X5 142 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 GPSM1Q86YR5 675 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 KBTBD2Q8IY47 623 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 AFAP1L2Q8N4X5 818 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 CYB5D2Q8WUJ1 264 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 ACOX2Q99424 681 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 MBD1Q9UIS9 605 aaPredicted RBP14.92□□□□□ -0.02
GPC3-202ENST00000394299 VPS9D1Q9Y2B5 631 aa14.92□□□□□ -0.02
GPC3-202ENST00000394299 GLYATL1P3A0A0U1RQE8 302 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 PSMD12O00232 456 aaPredicted RBP14.91□□□□□ -0.02
GPC3-202ENST00000394299 PFDN6O15212 129 aa14.91□□□□□ -0.02
GPC3-202ENST00000394299 SNUPNO95149 360 aaKnown RBP14.91□□□□□ -0.02
GPC3-202ENST00000394299 SLC25A14O95258 325 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms