RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 FBXW5Q969U6 566 aa15.43■□□□□ 0.06
FXN-201ENST00000377270 SGK3Q96BR1 496 aa15.43■□□□□ 0.06
FXN-201ENST00000377270 MED10Q9BTT4 135 aa15.43■□□□□ 0.06
FXN-201ENST00000377270 ANKRD60Q9BZ19 345 aa15.43■□□□□ 0.06
FXN-201ENST00000377270 LRRC4Q9HBW1 653 aa15.43■□□□□ 0.06
FXN-201ENST00000377270 TMEM216Q9P0N5 145 aa15.43■□□□□ 0.06
FXN-201ENST00000377270 CACNG4Q9UBN1 327 aa15.43■□□□□ 0.06
FXN-201ENST00000377270 PTBP2Q9UKA9 531 aaKnown RBP15.43■□□□□ 0.06
FXN-201ENST00000377270 USP3Q9Y6I4 520 aa15.43■□□□□ 0.06
FXN-201ENST00000377270 CTDSP2O14595 271 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 PTGESO14684 152 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 CSH1P0DML2 217 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 CSH2P0DML3 217 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 NPR3P17342 541 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 ME2P23368 584 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 CSTF2P33240 577 aaKnown RBP eCLIP15.42■□□□□ 0.069e-8■■■■□ 22.8
FXN-201ENST00000377270 TMBIM6P55061 237 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 S100A12P80511 92 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 CEACAM7Q14002 265 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 ALFQ53S48 1182 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 ZNF438Q7Z4V0 828 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 DMRTB1Q96MA1 342 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 EBNA1BP2Q99848 306 aaKnown RBP15.42■□□□□ 0.06
FXN-201ENST00000377270 PFDN2Q9UHV9 154 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 STON1Q9Y6Q2 735 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 LEUTXA8MZ59 168 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 MTHFD1P11586 935 aaKnown RBP15.42■□□□□ 0.06
FXN-201ENST00000377270 TPSB2P20231 275 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 FMO4P31512 558 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 MAGEA3P43357 314 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 ATXN3P54252 364 aaPredicted RBP15.42■□□□□ 0.06
FXN-201ENST00000377270 PKNOX1P55347 436 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 BFSP2Q13515 415 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 TPSAB1Q15661 275 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 TRMT10BQ6PF06 316 aaKnown RBP15.42■□□□□ 0.06
FXN-201ENST00000377270 PAQR9Q6ZVX9 377 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 KCTD8Q6ZWB6 473 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 PM20D2Q8IYS1 436 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 CHAC2Q8WUX2 184 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 S100ZQ8WXG8 99 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 SNAPC3Q92966 411 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 TTYH2Q9BSA4 534 aa15.42■□□□□ 0.06
FXN-201ENST00000377270 C20orf96Q9NUD7 363 aaPredicted RBP15.42■□□□□ 0.06
FXN-201ENST00000377270 DNAH12Q6ZR08 3092 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 PDCD11Q14690 1871 aaKnown RBP15.41■□□□□ 0.06
FXN-201ENST00000377270 CENPFP49454 3210 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 MEIS3P2A8K0S8 358 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 M0QYT0 321 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 TOR1BO14657 336 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 UGT2B4P06133 528 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 SPNP16150 400 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 LEPRP48357 1165 aaKnown RBP15.41■□□□□ 0.06
FXN-201ENST00000377270 RABGGTBP53611 331 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 BNIP2Q12982 314 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 TOP3AQ13472 1001 aaPredicted RBP15.41■□□□□ 0.06
FXN-201ENST00000377270 Q3ZCU0 254 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 SYPL2Q5VXT5 272 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 SEMA6AQ9H2E6 1030 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 SLC39A1Q9NY26 324 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 EMCNQ9ULC0 261 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 RGSL1A5PLK6 1076 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 FAM155AB1AL88 458 aaPredicted RBP15.41■□□□□ 0.06
FXN-201ENST00000377270 CFLARO15519 480 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 MFSD11O43934 449 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 GREM1O60565 184 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 NDUFS6O75380 124 aaKnown RBP15.41■□□□□ 0.06
FXN-201ENST00000377270 HMGN1P05114 100 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 HOXC13P31276 330 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 NOS2P35228 1153 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 SERPINB5P36952 375 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 SEMA5AQ13591 1074 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 AASDHQ4L235 1098 aaPredicted RBP15.41■□□□□ 0.06
FXN-201ENST00000377270 N4BP2L1Q5TBK1 243 aaPredicted RBP15.41■□□□□ 0.06
FXN-201ENST00000377270 OTUD1Q5VV17 481 aaPredicted RBP15.41■□□□□ 0.06
FXN-201ENST00000377270 TIFABQ6ZNK6 161 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 CLEC20AQ6ZU45 233 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 PARP8Q8N3A8 854 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 USP13Q92995 863 aaPredicted RBP15.41■□□□□ 0.06
FXN-201ENST00000377270 MARVELD3Q96A59 401 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 GPRC5BQ9NZH0 403 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 IL37Q9NZH6 218 aa15.41■□□□□ 0.06
FXN-201ENST00000377270 A0A0A0MRY4 1105 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 HACD1B0YJ81 288 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 ACOT8O14734 319 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 ST8SIA5O15466 376 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 GSNP06396 782 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 SELLP14151 372 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 ARRB2P32121 409 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 SOX11P35716 441 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 SOX9P48436 509 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 SERPINB9P50453 376 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 TKTL1P51854 596 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 ABCE1P61221 599 aaKnown RBP15.4■□□□□ 0.06
FXN-201ENST00000377270 ERVK-21P61565 698 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 PCLAFQ15004 111 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 FSCN1Q16658 493 aaKnown RBP15.4■□□□□ 0.06
FXN-201ENST00000377270 PLA2G4EQ3MJ16 856 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 KIAA0319Q5VV43 1072 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 EPGNQ6UW88 154 aa15.4■□□□□ 0.06
FXN-201ENST00000377270 HFE2Q6ZVN8 426 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms