RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 FAM124AQ86V42 546 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 KRT222Q8N1A0 295 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 PGBD3Q8N328 593 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 BANPQ8N9N5 519 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 CCDC97Q96F63 343 aaPredicted RBP17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 COX14Q96I36 57 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 LENG8Q96PV6 779 aaPredicted RBP17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 KLF6Q99612 283 aaPredicted RBP17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 BOCQ9BWV1 1114 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 FAM126AQ9BYI3 521 aaPredicted RBP17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 SLC17A9Q9BYT1 436 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 CLPBQ9H078 707 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 CAB39LQ9H9S4 337 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 GNPTGQ9UJJ9 305 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 SMG5Q9UPR3 1016 aaKnown RBP17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 VWA7Q9Y334 891 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 OAS3Q9Y6K5 1087 aaKnown RBP17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 PLXND1Q9Y4D7 1925 aa17.05■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3DA0A087WVF3 549 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3IA0A087WXS9 549 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3EA0A087X179 549 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3KA0A087X1G2 549 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 IGHV1OR15-9A0A0B4J2B8 117 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3FA6NER0 549 aaPredicted RBP17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3LB9A6J9 549 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 CFAP99D6REC4 459 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 AP2A2O94973 939 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3HP0C7X1 549 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 SLC35E2BP0CK96 405 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 PYGBP11216 843 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 BRAFP15056 766 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 STMN1P16949 149 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TYK2P29597 1187 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 CD6P30203 668 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 GPR1P46091 355 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 CXCL12P48061 93 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 PDE1CQ14123 709 aaPredicted RBP17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 KHDC1Q4VXA5 237 aaKnown RBP17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3GQ6DHY5 549 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3CQ6IPX1 549 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 PNCKQ6P2M8 343 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 CLEC14AQ86T13 490 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 LCA5Q86VQ0 697 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 CEP97Q8IW35 865 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 TBC1D3Q8IZP1 549 aaPredicted RBP17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 C4orf33Q8N1A6 199 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 CENPTQ96BT3 561 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 PCED1AQ9H1Q7 454 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 CCDC68Q9H2F9 335 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 PRMT8Q9NR22 394 aaPredicted RBP17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 PCMTD2Q9NV79 361 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 WSB2Q9NYS7 404 aaPredicted RBP17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 CYP8B1Q9UNU6 501 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 ANKRD6Q9Y2G4 727 aa17.04■□□□□ 0.32
HLA-DMA-201ENST00000374843 A0A096LPK6 155 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 C2P06681 752 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 FMO4P31512 558 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 IGFALSP35858 605 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 TRIM23P36406 574 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 NUDT1P36639 197 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 PPP2R2AP63151 447 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 SGCGQ13326 291 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 TAF1BQ53T94 588 aaPredicted RBP17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 KIAA0895LQ68EN5 471 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 KDM7AQ6ZMT4 941 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 PLA2G15Q8NCC3 412 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 TOE1Q96GM8 510 aaKnown RBP17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 TEX101Q9BY14 249 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 ZCCHC2Q9C0B9 1178 aaKnown RBP17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 TAS2R13Q9NYV9 303 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 OGFRQ9NZT2 677 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 KLHL42Q9P2K6 505 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 PRSS21Q9Y6M0 314 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 TECTAO75443 2155 aa17.03■□□□□ 0.32
HLA-DMA-201ENST00000374843 BDP1A6H8Y1 2624 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 A0A087X1B8 175 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 PRR23AA6NEV1 266 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 TMEM221A6NGB7 291 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 FAM47DPA6NHR8 397 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 GOLGA8RI6L899 631 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 M0R296 226 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 QSOX1O00391 747 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 RAD51BO15315 384 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 PHGDHO43175 533 aaKnown RBP17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 SGTAO43765 313 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 NIPSNAP2O75323 286 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 PCCBP05166 539 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 GSTA1P08263 222 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 RALBP11234 206 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 COL6A2P12110 1019 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 ATP1B2P14415 290 aaPredicted RBP17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 AKT1P31749 480 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 HPDP32754 393 aaPredicted RBP17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 CRHR1P34998 444 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 SLC26A3P40879 764 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 SLC12A2P55011 1212 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 CDK3Q00526 305 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 TMEM31Q5JXX7 168 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 PIM3Q86V86 326 aa17.02■□□□□ 0.32
HLA-DMA-201ENST00000374843 HEATR4Q86WZ0 1026 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms