RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CCNYL3P0C7X3 344 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 MAPK9P45984 424 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 HSF2Q03933 536 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 PTP4A2Q12974 167 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 DEF8Q6ZN54 512 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 DENND2DQ9H6A0 471 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 CAB39LQ9H9S4 337 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 ERVK-5Q9HDB9 667 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 AASDHPPTQ9NRN7 309 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 SMPD3Q9NY59 655 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 SCN7AQ01118 1682 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 ADSLP30566 484 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 MTHFRP42898 656 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 CLCNKBP51801 687 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 CPSF6Q16630 551 aaKnown RBP eCLIP12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 LSM12Q3MHD2 195 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 METTL21CQ5VZV1 264 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 PGBD2Q6P3X8 592 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 AGMOQ6ZNB7 445 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 STX12Q86Y82 276 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 SPPL2CQ8IUH8 684 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 NDOR1Q9UHB4 597 aa12.21□□□□□ -0.45
NPLOC4-202ENST00000374747 BTAF1O14981 1849 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 BCKDKO14874 412 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 SYN3O14994 580 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 HADHBP55084 474 aaKnown RBP12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 ARF5P84085 180 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 SLC1A5Q15758 541 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 GLYATQ6IB77 296 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 FBXO42Q6P3S6 717 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 KLHL23Q8NBE8 558 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 EZH1Q92800 747 aaPredicted RBP12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 TMEM165Q9HC07 324 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 SRRDQ9UH36 339 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 GTF2IRD1Q9UHL9 959 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 ZNF180Q9UJW8 692 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 AJAP1Q9UKB5 411 aaPredicted RBP12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 DGKBQ9Y6T7 804 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 U3KQV3 271 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 TLR5O60602 858 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 SIN3BO75182 1162 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 OR1D2P34982 312 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 GLUD2P49448 558 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 SEPHS1P49903 392 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 CCNHP51946 323 aaPredicted RBP12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 CDH13P55290 713 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 DET1Q7L5Y6 550 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 C1GALT1C1Q96EU7 318 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 LINGO1Q96FE5 620 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 B3GNT5Q9BYG0 378 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 GSDMCQ9BYG8 508 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 RHBGQ9H310 441 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 GPN1Q9HCN4 374 aaPredicted RBP12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 MFHAS1Q9Y4C4 1052 aa12.21□□□□□ -0.46
NPLOC4-202ENST00000374747 MDM4O15151 490 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 PAPSS1O43252 624 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 FTH1P02794 183 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 THRBP10828 461 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 COL6A2P12110 1019 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 MAGP20916 626 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 IGFBP5P24593 272 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 SDC2P34741 201 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 TNFAIP8L3Q5GJ75 292 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 CDCA2Q69YH5 1023 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 FBXL19Q6PCT2 694 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 OR4L1Q8NH43 312 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 HTATIP2Q9BUP3 242 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 RSPH9Q9H1X1 276 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 DSN1Q9H410 356 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 NR2E1Q9Y466 385 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 NT5C1B-RDH14C9J2C7 533 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 LRATO95237 230 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 C2P06681 752 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 LPOP22079 712 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 ADRA1BP35368 520 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 SNRPD1P62314 119 aaKnown RBP12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 RALGDSQ12967 914 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 TAPT1Q6NXT6 567 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 RASSF6Q6ZTQ3 369 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 RASAL3Q86YV0 1011 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 PJA1Q8NG27 643 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 C1QTNF7Q9BXJ2 289 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 SP140LQ9H930 580 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 BPIFA1Q9NP55 256 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 ZNHIT2Q9UHR6 403 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 VNN1O95497 513 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 POLR2EP19388 210 aaKnown RBP12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 SDHAF4Q5VUM1 108 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 COLGALT2Q8IYK4 626 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 CNTD1Q8N815 330 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 LRRC57Q8N9N7 239 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 HDAC10Q969S8 669 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 TELO2Q9Y4R8 837 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 FGF1P05230 155 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 CHRNB2P17787 502 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 PRDX6P30041 224 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 HOXD13P35453 343 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 PTPN9P43378 593 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 PFKPQ01813 784 aa12.2□□□□□ -0.46
NPLOC4-202ENST00000374747 IL18Q14116 193 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms