RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MAP2K5Q13163 448 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 SEMA5AQ13591 1074 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 PTGES3Q15185 160 aaKnown RBP14.13□□□□□ -0.15
LMX1B-202ENST00000373474 FAM151BQ6UXP7 276 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 NDRG1Q92597 394 aaKnown RBP14.13□□□□□ -0.15
LMX1B-202ENST00000373474 SLCO2A1Q92959 643 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 TEFMQ96QE5 360 aaKnown RBP14.13□□□□□ -0.15
LMX1B-202ENST00000373474 CIB1Q99828 191 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 FTHL17Q9BXU8 183 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 UNC93B1Q9H1C4 597 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 EXD2Q9NVH0 621 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 SMIM28A0A1B0GU29 152 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 ATP6V1G1O75348 118 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 LSM12Q3MHD2 195 aaKnown RBP14.13□□□□□ -0.15
LMX1B-202ENST00000373474 RFWD3Q6PCD5 774 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 ZNF781Q8N8C0 355 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 TEX47Q8TBZ9 253 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 SIPA1Q96FS4 1042 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 FAXDC2Q96IV6 333 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 EXOC2Q96KP1 924 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 FRMD6Q96NE9 622 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 RIPK3Q9Y572 518 aa14.13□□□□□ -0.15
LMX1B-202ENST00000373474 AXIN1O15169 862 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 APOL3O95236 402 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 HIST1H2ABP04908 130 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 CD52P31358 61 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ASPAP45381 313 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 MPP1Q00013 466 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 IL18Q14116 193 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ARL13AQ5H913 290 aaPredicted RBP14.12□□□□□ -0.15
LMX1B-202ENST00000373474 GLYATQ6IB77 296 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 CNSTQ6PJW8 725 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 HIST3H2AQ7L7L0 130 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ANKS1BQ7Z6G8 1248 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 SCAIQ8N9R8 606 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 HIST1H2ACQ93077 130 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 TMCO6Q96DC7 493 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 MYO19Q96H55 970 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 BTN2A3PQ96KV6 586 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ARHGEF4Q9NR80 690 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 PCDHB1Q9Y5F3 818 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 M0R2N6 131 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 MSI1O43347 362 aaKnown RBP14.12□□□□□ -0.15
LMX1B-202ENST00000373474 NPHS1O60500 1241 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 LRATO95237 230 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 HLA-DQA2P01906 255 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 CYP4B1P13584 511 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 IST1P53990 364 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 PDCD4Q53EL6 469 aaKnown RBP14.12□□□□□ -0.15
LMX1B-202ENST00000373474 SULT1C3Q6IMI6 304 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 TRIM40Q6P9F5 258 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 SPAG16Q8N0X2 631 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 UBR7Q8N806 425 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 GPR156Q8NFN8 814 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 GRIP1Q9Y3R0 1128 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 LDOC1O95751 146 aaPredicted RBP14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ITIH1P19827 911 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 CYP4F2P78329 520 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 CYP4F3Q08477 520 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 CPSF6Q16630 551 aaKnown RBP eCLIP14.12□□□□□ -0.15
LMX1B-202ENST00000373474 CYP4X1Q8N118 509 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 RBM4BQ9BQ04 359 aaKnown RBP14.12□□□□□ -0.15
LMX1B-202ENST00000373474 RBM4Q9BWF3 364 aaKnown RBP14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ZNHIT2Q9UHR6 403 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 OGDHLQ9ULD0 1010 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 PCDHGA4Q9Y5G9 962 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 OR6C75A6NL08 312 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 SLC22A2O15244 555 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 PRKAR2AP13861 404 aaKnown RBP14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ABRQ12979 859 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 MTAPQ13126 283 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 GPR158Q5T848 1215 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 FSTL4Q6MZW2 842 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ROPN1LQ96C74 230 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 C1QTNF7Q9BXJ2 289 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ACSS2Q9NR19 701 aa14.12□□□□□ -0.15
LMX1B-202ENST00000373474 ZNF490Q9ULM2 529 aaPredicted RBP14.12□□□□□ -0.15
LMX1B-202ENST00000373474 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.11□□□□□ -0.15
LMX1B-202ENST00000373474 FAM172BPA6NC97 362 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 ORC5O43913 435 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 REM1O75628 298 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 FOXN2P32314 431 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 FAM92BQ6ZTR7 304 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 PTCHD4Q6ZW05 846 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 PNPT1Q8TCS8 783 aaKnown RBP14.11□□□□□ -0.15
LMX1B-202ENST00000373474 LENG8Q96PV6 779 aaPredicted RBP14.11□□□□□ -0.15
LMX1B-202ENST00000373474 CLCC1Q96S66 551 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 MARCH7Q9H992 704 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 MFHAS1Q9Y4C4 1052 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 RGS10O43665 173 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 VNN1O95497 513 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 RLN1P04808 185 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 BRCC3P46736 316 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 RGS1Q08116 209 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 HSDL1Q3SXM5 330 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 GPAT3Q53EU6 434 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 HLA-DQA1Q5Y7H0 255 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 RD3Q7Z3Z2 195 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 THAP5Q7Z6K1 395 aa14.11□□□□□ -0.15
LMX1B-202ENST00000373474 STYXQ8WUJ0 223 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms