RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CDC7O00311 574 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 VIPR2P41587 438 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 PTSQ03393 145 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 ZDHHC20Q5W0Z9 365 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 TRIM68Q6AZZ1 485 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 BRAT1Q6PJG6 821 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 CPNE9Q8IYJ1 553 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 ARHGAP24Q8N264 748 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 FBXO39Q8N4B4 442 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 RBM15BQ8NDT2 890 aaKnown RBP24.76■■□□□ 1.55
CTSA-203ENST00000372459 GPR26Q8NDV2 337 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 SORCS1Q8WY21 1168 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 FUBP1Q96AE4 644 aaKnown RBP24.76■■□□□ 1.55
CTSA-203ENST00000372459 RSPRY1Q96DX4 576 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 MAELQ96JY0 434 aaKnown RBP24.76■■□□□ 1.55
CTSA-203ENST00000372459 OSBPL1AQ9BXW6 950 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 CIPCQ9C0C6 399 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 LMAN2LQ9H0V9 348 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 ECI2O75521 394 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 JUNP05412 331 aaKnown RBP24.76■■□□□ 1.55
CTSA-203ENST00000372459 CISD3P0C7P0 127 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 UGT1A6P19224 532 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 UGT1A1P22309 533 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 UGT1A4P22310 534 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 LHCGRP22888 699 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 UGT1A3P35503 534 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 UGT1A5P35504 534 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 VASPP50552 380 aaPredicted RBP24.76■■□□□ 1.55
CTSA-203ENST00000372459 SATB1Q01826 763 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 SEMG2Q02383 582 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 WASHC2DQ5SRD0 308 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 BOCQ9BWV1 1114 aa24.76■■□□□ 1.55
CTSA-203ENST00000372459 TTC34A8MYJ7 566 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 ASLP04424 464 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 SRPRAP08240 638 aaKnown RBP24.75■■□□□ 1.55
CTSA-203ENST00000372459 PRDX6P30041 224 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 CA5AP35218 305 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 PBX2P40425 430 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 MXRA7P84157 204 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 DNAL1Q4LDG9 190 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 TCEAL5Q5H9L2 206 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 NXNQ6DKJ4 435 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 NPAS3Q8IXF0 933 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 PHTF2Q8N3S3 785 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 BPIFB1Q8TDL5 484 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 PBXIP1Q96AQ6 731 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 MMADHCQ9H3L0 296 aaPredicted RBP24.75■■□□□ 1.55
CTSA-203ENST00000372459 RNPEPL1Q9HAU8 725 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 B4GALT6Q9UBX8 382 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 FIS1Q9Y3D6 152 aa24.75■■□□□ 1.55
CTSA-203ENST00000372459 COPAP53621 1224 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 FAM78AQ5JUQ0 283 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 NXPE1Q8N323 547 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 PDLIM5Q96HC4 596 aaKnown RBP24.74■■□□□ 1.55
CTSA-203ENST00000372459 TMCO1Q9UM00 188 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 TRAF6Q9Y4K3 522 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 CHD9Q3L8U1 2897 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 ATG2AQ2TAZ0 1938 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 AGAP14A8MT82 685 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 UBFD1O14562 309 aaKnown RBP24.74■■□□□ 1.55
CTSA-203ENST00000372459 SIX3O95343 332 aaPredicted RBP24.74■■□□□ 1.55
CTSA-203ENST00000372459 FSHRP23945 695 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 MAGEA10P43363 369 aaPredicted RBP24.74■■□□□ 1.55
CTSA-203ENST00000372459 BTKQ06187 659 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 KLF10Q13118 480 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 NAA25Q14CX7 972 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 ASB16Q96NS5 453 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 PLEKHG4BQ96PX9 1271 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 TNFRSF12AQ9NP84 129 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 SLC27A6Q9Y2P4 619 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 WASF2Q9Y6W5 498 aa24.74■■□□□ 1.55
CTSA-203ENST00000372459 SDHDO14521 159 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 PEX11AO75192 247 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 SKAP2O75563 359 aaPredicted RBP24.73■■□□□ 1.55
CTSA-203ENST00000372459 CYP2A6P11509 494 aaPredicted RBP24.73■■□□□ 1.55
CTSA-203ENST00000372459 NAA20P61599 178 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 TXNDC11Q6PKC3 985 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 POU5F2Q8N7G0 328 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 VN1R2Q8NFZ6 395 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 CEP70Q8NHQ1 597 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 SMARCD2Q92925 531 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 CCDC97Q96F63 343 aaPredicted RBP24.73■■□□□ 1.55
CTSA-203ENST00000372459 MEAF6Q9HAF1 191 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 STX16-NPEPL1H3BU86 382 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 STX16O14662 325 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 SLC22A2O15244 555 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 KLK8O60259 260 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 LEFTY1O75610 366 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 NFATC1O95644 943 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 TSPAN8P19075 237 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 NFKBIAP25963 317 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 EEF1DP29692 281 aaKnown RBP24.73■■□□□ 1.55
CTSA-203ENST00000372459 PGM1P36871 562 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 CDH13P55290 713 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 KCNC3Q14003 757 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 ARHGEF7Q14155 803 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 MACC1Q6ZN28 852 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 C12orf40Q86WS4 652 aa24.73■■□□□ 1.55
CTSA-203ENST00000372459 CPSF7Q8N684 471 aaKnown RBP24.73■■□□□ 1.55
CTSA-203ENST00000372459 FBXO27Q8NI29 283 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms