RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 PGAM4Q8N0Y7 254 aa17.32■□□□□ 0.36
LMNA-205ENST00000368299 EEF1AKMT1Q8WVE0 214 aa17.32■□□□□ 0.36
LMNA-205ENST00000368299 RPL10LQ96L21 214 aaKnown RBP17.32■□□□□ 0.36
LMNA-205ENST00000368299 MARK4Q96L34 752 aa17.32■□□□□ 0.36
LMNA-205ENST00000368299 LBHD1Q9BQE6 289 aaPredicted RBP17.32■□□□□ 0.36
LMNA-205ENST00000368299 CPEB1Q9BZB8 566 aaKnown RBP17.32■□□□□ 0.36
LMNA-205ENST00000368299 ASB8Q9H765 288 aa17.32■□□□□ 0.36
LMNA-205ENST00000368299 TDP1Q9NUW8 608 aa17.32■□□□□ 0.36
LMNA-205ENST00000368299 ZMYM5Q9UJ78 669 aa17.32■□□□□ 0.36
LMNA-205ENST00000368299 GNPTGQ9UJJ9 305 aa17.32■□□□□ 0.36
LMNA-205ENST00000368299 WASF2Q9Y6W5 498 aa17.32■□□□□ 0.36
LMNA-205ENST00000368299 TRBV5-4A0A0C4DH59 114 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 TLL1O43897 1013 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 CLDN7O95471 211 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 MLYCDO95822 493 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 STX5Q13190 355 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 ART3Q13508 389 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 C22orf39Q6P5X5 142 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 TMEM154Q6P9G4 183 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 GPSM1Q86YR5 675 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 PCDH20Q8N6Y1 951 aaKnown RBP17.31■□□□□ 0.36
LMNA-205ENST00000368299 PHOSPHO2Q8TCD6 241 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 POF1BQ8WVV4 589 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 RCN3Q96D15 328 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 ZNF184Q99676 751 aaPredicted RBP17.31■□□□□ 0.36
LMNA-205ENST00000368299 VCXQ9H320 206 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 IL26Q9NPH9 171 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 TBC1D14Q9P2M4 693 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 IKZF3Q9UKT9 509 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 POMPQ9Y244 141 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 PPIL1Q9Y3C6 166 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 DNAJC15Q9Y5T4 150 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 HELZP42694 1942 aaKnown RBP17.31■□□□□ 0.36
LMNA-205ENST00000368299 GLYATL1P3A0A0U1RQE8 302 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 A0A1W2PQ67 120 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 GAPDHSO14556 408 aaPredicted RBP17.31■□□□□ 0.36
LMNA-205ENST00000368299 SNX2O60749 519 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 PDE5AO76074 875 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 GKP32189 559 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 SPAM1P38567 509 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 DMC1Q14565 340 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 TEAD2Q15562 447 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 FUT11Q495W5 492 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 TMEM240Q5SV17 173 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 PTRHD1Q6GMV3 140 aaKnown RBP17.31■□□□□ 0.36
LMNA-205ENST00000368299 CPNE9Q8IYJ1 553 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 TRPC4APQ8TEL6 797 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 BADQ92934 168 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 ECHDC3Q96DC8 303 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 TCEAL4Q96EI5 215 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 SCRN2Q96FV2 425 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 UTP6Q9NYH9 597 aaKnown RBP17.31■□□□□ 0.36
LMNA-205ENST00000368299 PCDH10Q9P2E7 1040 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 SLC4A7Q9Y6M7 1214 aa17.31■□□□□ 0.36
LMNA-205ENST00000368299 PSMD12O00232 456 aaPredicted RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 VPS4BO75351 444 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 RHOP08100 348 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 CTSOP43234 321 aaPredicted RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 CCNHP51946 323 aaPredicted RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 IRX1P78414 480 aaPredicted RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 CDC16Q13042 620 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 CYHR1Q6ZMK1 362 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 BNC2Q6ZN30 1099 aaPredicted RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 TPRG1Q6ZUI0 275 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 USP45Q70EL2 814 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 EFL1Q7Z2Z2 1120 aaKnown RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 ADAMTSL2Q86TH1 951 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 TMEM25Q86YD3 366 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 SPPL3Q8TCT6 385 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 UCMAQ8WVF2 138 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 TWIST2Q8WVJ9 160 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 ZNF641Q96N77 438 aaPredicted RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 BBS2Q9BXC9 721 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 MRPL1Q9BYD6 325 aaKnown RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 SUV39H2Q9H5I1 410 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 SARS2Q9NP81 518 aaKnown RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 KIAA0100Q14667 2235 aaKnown RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 LRRC14BA6NHZ5 514 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 XYLBO75191 536 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 MOSPD3O75425 235 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 POP4O95707 220 aaKnown RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 HNRNPA1P09651 372 aaKnown RBP eCLIP17.3■□□□□ 0.36
LMNA-205ENST00000368299 ANPEPP15144 967 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 BPIP17213 487 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 ACRV1P26436 265 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 ACADVLP49748 655 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 STK19P49842 368 aaPredicted RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 STX1BP61266 288 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 PTK2BQ14289 1009 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 FASTKQ14296 549 aaKnown RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 PPP1R3AQ16821 1122 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 ELMSAN1Q6PJG2 1045 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 HPS6Q86YV9 775 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 ZNF483Q8TF39 744 aaPredicted RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 IRF7Q92985 503 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 CCDC124Q96CT7 223 aaKnown RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 NSUN5Q96P11 429 aaKnown RBP17.3■□□□□ 0.36
LMNA-205ENST00000368299 SLC24A3Q9HC58 644 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 NUDT4Q9NZJ9 180 aa17.3■□□□□ 0.36
LMNA-205ENST00000368299 CRLS1Q9UJA2 301 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms