RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 Q8N402 240 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PHYHIPLQ96FC7 376 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 UCKL1Q9NWZ5 548 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 RNF212BA8MTL3 300 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 CPA4Q9UI42 421 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 VPS26AO75436 327 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GNRH1P01148 92 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 FOXN2P32314 431 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 SRSF11Q05519 484 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 POU4F3Q15319 338 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GALNTL6Q49A17 601 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ILDR2Q71H61 639 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 TBC1D20Q96BZ9 403 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 NEURL1BA8MQ27 555 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ATP5C1P36542 298 aaKnown RBP3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PGDP52209 483 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 DUOXA2Q1HG44 320 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 MEIS3P1A6NDR6 274 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 EFCAB7A8K855 629 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 FGF19O95750 216 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ACTC1P68032 377 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ACTA1P68133 377 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 LSAMPQ13449 338 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 USP41Q3LFD5 358 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PRAMEF8Q5VWM4 474 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PRAMEF7Q5VXH5 474 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZDHHC4Q9NPG8 344 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 PRDM9Q9NQV7 894 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 GDAP2Q9NXN4 497 aa3.74□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF804BA4D1E1 1349 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 IQSEC2Q5JU85 1478 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SPDYE16A6NNV3 312 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 IL3P08700 152 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TNNI3P19429 210 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CYP2B6P20813 491 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 VIPR1P32241 457 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SRP9P49458 86 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 FSCN1Q16658 493 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 C19orf35Q6ZS72 473 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 FAM46DQ8NEK8 389 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 MYOCQ99972 504 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 OCSTAMPQ9BR26 566 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GRIP2Q9C0E4 1043 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 M0QZK8 103 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GGCTO75223 188 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CETPP11597 493 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HIBADHP31937 336 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GAD2Q05329 585 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 LSM12Q3MHD2 195 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TAPT1Q6NXT6 567 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 MRPL41Q8IXM3 137 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 OR56A4Q8NGH8 313 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ELP5Q8TE02 316 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF436Q9C0F3 470 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 UXTQ9UBK9 157 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 IFNL3Q8IZI9 196 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZUFSPQ96AP4 578 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PNKPQ96T60 521 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 REEP4Q9H6H4 257 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CSADQ9Y600 493 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ATP6V1G1O75348 118 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GCNT3O95395 438 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CASRP41180 1078 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 MCAMP43121 646 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SMSP52788 366 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RNF31Q96EP0 1072 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SEC22CQ9BRL7 303 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 MCMBPQ9BTE3 642 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SACM1LQ9NTJ5 587 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CRYL1Q9Y2S2 319 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TOR1BO14657 336 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TOXO94900 526 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HIST1H2AGP0C0S8 130 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HIST1H2ADP20671 130 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RAB8AP61006 207 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 KCNC4Q03721 635 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF655Q8N720 491 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HIST1H2AHQ96KK5 128 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 LRR1Q96L50 414 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HIST1H2AJQ99878 128 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 H2AFJQ9BTM1 129 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 BIN3Q9NQY0 253 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SNTG2Q9NY99 539 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PCDHA3Q9Y5H8 950 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 A0A1W2PRB8 838 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 FSCN2O14926 492 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SNAPINO95295 136 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 NCS1P62166 190 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 AADACL2Q6P093 401 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HORMAD2Q8N7B1 307 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SUN3Q8TAQ9 357 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 LPGAT1Q92604 370 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CELF1Q92879 486 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SERAC1Q96JX3 654 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 MED17Q9NVC6 651 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PPP2R3BQ9Y5P8 575 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TRIM38O00635 465 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 UGT2B10P36537 528 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GLRBP48167 497 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SLC1A5Q15758 541 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms