RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SLC9B1Q4ZJI4 515 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 HSD17B12Q53GQ0 312 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 EIPR1Q53HC9 387 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 CREG2Q8IUH2 290 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ARRDC4Q8NCT1 418 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF700Q9H0M5 742 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 BTRCQ9Y297 605 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 MAB21L2Q9Y586 359 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 CCRL2O00421 344 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 FGF1P05230 155 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 MLLT6P55198 1093 aaPredicted RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 DNAAF5Q86Y56 855 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 GRIN3AQ8TCU5 1115 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 HASPINQ8TF76 798 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 C11orf16Q9NQ32 467 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ABCC3O15438 1527 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 DDX6P26196 483 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 VWA5B1Q5TIE3 1220 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ZDHHC20Q5W0Z9 365 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 FIP1L1Q6UN15 594 aaKnown RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ART4Q93070 314 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TRIM43Q96BQ3 446 aaPredicted RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 SEMA6BQ9H3T3 888 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 FBXO6Q9NRD1 293 aaPredicted RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PCDHGB2Q9Y5G2 931 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 USP12O75317 370 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PPP3CAQ08209 521 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 GRM3Q14832 879 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TIGD2Q4W5G0 525 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 IDNKQ5T6J7 187 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 C17orf64Q86WR6 236 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TBCCD1Q9NVR7 557 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 LYARQ9NX58 379 aaKnown RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ABCD2Q9UBJ2 740 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PCDHGB1Q9Y5G3 927 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 A0A087X0B3 334 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PIGBOS1A0A0B4J2F0 54 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 NPHP4O75161 1426 aaPredicted RBP9.24□□□□□ -0.93
VPS13A-203ENST00000360280 GADD45AP24522 165 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 CREMQ03060 361 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 FBXO43Q4G163 708 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 PGAM4Q8N0Y7 254 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 ADAMTS15Q8TE58 950 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 TBC1D17Q9HA65 648 aa9.24□□□□□ -0.93
VPS13A-203ENST00000360280 GLRA2P23416 452 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 GDI2P50395 445 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 VLDLRP98155 873 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 PRKCDQ05655 676 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 PAN2Q504Q3 1202 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 LPIN3Q9BQK8 851 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 PSMD9O00233 223 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SHBGP04278 402 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 USP17L7P0C7H9 530 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF286BP0CG31 522 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF311Q5JNZ3 666 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ANGEL2Q5VTE6 544 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 UNC5AQ6ZN44 842 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CNDP2Q96KP4 475 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 DHRS1Q96LJ7 313 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 LRRC19Q9H756 370 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 UCKL1Q9NWZ5 548 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SEC14L4Q9UDX3 406 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CASTOR2A6NHX0 329 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 OR6C70A6NIJ9 312 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 NOTOA8MTQ0 251 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CPNE3O75131 537 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 C16orf46Q6P387 395 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SLC27A1Q6PCB7 646 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 C4orf19Q8IY42 314 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 OR10H4Q8NGA5 316 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 TCEAL3Q969E4 200 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 AARSD1Q9BTE6 412 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CRB1P82279 1406 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SLIT1O75093 1534 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 SIGLEC16A6NMB1 481 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 TNFRSF11BO00300 401 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ATP5C1P36542 298 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 MAB21L1Q13394 359 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 DNERQ8NFT8 737 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 RHBDF1Q96CC6 855 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 DMRTB1Q96MA1 342 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 KCTD7Q96MP8 289 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 TOR3AQ9H497 397 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 EDARQ9UNE0 448 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 RPH3AQ9Y2J0 694 aaPredicted RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 DRD4P21917 467 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 LPOP22079 712 aaPredicted RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF627Q7L945 461 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 TDRPQ86YL5 185 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 BEND7Q8N7W2 519 aaPredicted RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 GATAD2BQ8WXI9 593 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 TCF25Q9BQ70 676 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 B3GNT4Q9C0J1 378 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 ARHGEF4Q9NR80 690 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 IPO13O94829 963 aaKnown RBP9.23□□□□□ -0.93
VPS13A-203ENST00000360280 PRAMEF12O95522 483 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 AMPD1P23109 780 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 CFAP206Q8IYR0 622 aa9.23□□□□□ -0.93
VPS13A-203ENST00000360280 OR5J2Q8NH18 312 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms