RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZSCAN5AQ9BUG6 496 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 CD93Q9NPY3 652 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 ZDHHC3Q9NYG2 299 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 GALPQ9UBC7 116 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 SCML1Q9UN30 329 aa17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 MRPS17Q9Y2R5 130 aaKnown RBP17.98■□□□□ 0.47
SMARCD3-202ENST00000356800 IGLON5A6NGN9 336 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 FAM170BA6NMN3 283 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 PLRG1O43660 514 aaKnown RBP17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 NIPSNAP2O75323 286 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 PCDH8O95206 1070 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 ESR1P03372 595 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 ZNF7P17097 686 aaPredicted RBP17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 TAC1P20366 129 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 RPS3P23396 243 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 PPARGP37231 505 aaPredicted RBP17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 SERPINB4P48594 390 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 CCDC15Q0P6D6 951 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 LRRC32Q14392 662 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 ITIH4Q14624 930 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 ZNF284Q2VY69 593 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 SEL1L3Q68CR1 1132 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 C16orf46Q6P387 395 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 CCDC91Q7Z6B0 441 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 CLDN19Q8N6F1 224 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 KCTD4Q8WVF5 259 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 FAM136AQ96C01 138 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 SHDQ96IW2 340 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 TTC1Q99614 292 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 CD320Q9NPF0 282 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 TMEM216Q9P0N5 145 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 ZFR2Q9UPR6 939 aaKnown RBP17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 ACOT9Q9Y305 439 aa17.97■□□□□ 0.47
SMARCD3-202ENST00000356800 IQCF5A8MTL0 148 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 TCP11X1B4DZS4 312 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 K7ESM1 405 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 PLIN3O60664 434 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 RHOBTB1O94844 696 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 DRD4P21917 467 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 ADPRHP54922 357 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 DPTQ07507 201 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 CCDC153Q494R4 210 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 KHDC1Q4VXA5 237 aaKnown RBP17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 N4BP2L1Q5TBK1 243 aaPredicted RBP17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 KIAA1324Q6UXG2 1013 aaKnown RBP17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 USP30Q70CQ3 517 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 UBALD2Q8IYN6 164 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 ARMC2Q8NEN0 867 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 OR14C36Q8NHC7 312 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 ANKRD49Q8WVL7 239 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 GPR78Q96P69 363 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 COPS8Q99627 209 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 CLPBQ9H078 707 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 CCDC68Q9H2F9 335 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 MBD1Q9UIS9 605 aaPredicted RBP17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 CNOT6Q9ULM6 557 aaKnown RBP17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 A0A087X1B8 175 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 NDUFAB1O14561 156 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 BIRC5O15392 142 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 VIMP08670 466 aaKnown RBP17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 FGL2Q14314 439 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 TTC31Q49AM3 519 aaPredicted RBP17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 TRIM67Q6ZTA4 783 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 SYT13Q7L8C5 426 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 LRRC34Q8IZ02 419 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 SPATA6LQ8N4H0 392 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 LKAAEAR1Q8TD35 194 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 BTN2A2Q8WVV5 523 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 HMGB4Q8WW32 186 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 UBXN10Q96LJ8 280 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 VPS35Q96QK1 796 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 GPR21Q99679 349 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 SLC30A3Q99726 388 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 GPAMQ9HCL2 828 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 IGSF5Q9NSI5 407 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 FZD4Q9ULV1 537 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 PCDHB1Q9Y5F3 818 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 COMMD10Q9Y6G5 202 aa17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 OAS3Q9Y6K5 1087 aaKnown RBP17.96■□□□□ 0.47
SMARCD3-202ENST00000356800 MTX2O75431 263 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 TM7SF2O76062 418 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 PROCP04070 461 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 CD9P21926 228 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 SLC26A3P40879 764 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 ZNF648Q5T619 568 aaPredicted RBP17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 MACC1Q6ZN28 852 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 FAM124AQ86V42 546 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 NLRP8Q86W28 1048 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 DDHD1Q8NEL9 900 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 GIMAP7Q8NHV1 300 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 LRRC8CQ8TDW0 803 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 ZNF75CPQ92670 426 aaPredicted RBP17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 KCNJ9Q92806 393 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 GLYATL1Q969I3 302 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 NXNL1Q96CM4 212 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 OSBPL6Q9BZF3 934 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D17Q9HA65 648 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 POPDC3Q9HBV1 291 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 TAS2R13Q9NYV9 303 aa17.95■□□□□ 0.46
SMARCD3-202ENST00000356800 SIRPGQ9P1W8 387 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms