RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 BORCS5Q969J3 196 aa5.75□□□□□ -1.49
SRGAP1-201ENST00000355086 PPP1R14BQ96C90 147 aa5.75□□□□□ -1.49
SRGAP1-201ENST00000355086 TBATAQ96M53 351 aa5.75□□□□□ -1.49
SRGAP1-201ENST00000355086 HOPXQ9BPY8 73 aaPredicted RBP5.75□□□□□ -1.49
SRGAP1-201ENST00000355086 RNASEH2AO75792 299 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 STBD1O95210 358 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 NADKO95544 446 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF20P17024 532 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SMARCD3Q6STE5 483 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CRYBG2Q8N1P7 616 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 TTC29Q8NA56 475 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 OR2T12Q8NG77 320 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ERMAPQ96PL5 475 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PRDM12Q9H4Q4 367 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 TNFRSF11BO00300 401 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PDCD5O14737 125 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CD2P06729 351 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CTBP1Q13363 440 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PRAMEF17Q5VTA0 474 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 NIPA1Q7RTP0 329 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 MPP5Q8N3R9 675 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SPERTQ8NA61 448 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 C12orf66Q96MD2 445 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 EHD4Q9H223 541 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 VWA7Q9Y334 891 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PCDHB1Q9Y5F3 818 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 TRAFD1O14545 582 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SMIM10L2AP0DMW4 78 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SMIM10L2BP0DMW5 78 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 OR3A3P47888 321 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 OR3A2P47893 321 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ANKRD52Q8NB46 1076 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 UFD1Q92890 307 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PPM1MQ96MI6 270 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 C1RP00736 705 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PGRP06401 933 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PTPRAP18433 802 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ATP5A1P25705 553 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 GJA8P48165 433 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CUZD1Q86UP6 607 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 GPR152Q8TDT2 470 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 EXOSC8Q96B26 276 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC39A3Q9BRY0 314 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 GLS2Q9UI32 602 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SHROOM2Q13796 1616 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 TRBV23OR9-2A0A075B6M9 112 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 BBIP1A8MTZ0 92 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PER2O15055 1255 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 UROSP10746 265 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ARMCX6Q7L4S7 300 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 DHDDSQ86SQ9 333 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 GHDCQ8N2G8 530 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 OR52J3Q8NH60 311 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ELAC1Q9H777 363 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 MED11Q9P086 117 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 IFT52Q9Y366 437 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 FKBP7Q9Y680 259 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 DDNO94850 711 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 UBAP2Q5T6F2 1119 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 FSTL5Q8N475 847 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 STYXQ8WUJ0 223 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SNRNP25Q9BV90 132 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 LRMDAQ9H2I8 198 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 C11orf16Q9NQ32 467 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 HYKKA2RU49 373 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 REM1O75628 298 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 HSD3B1P14060 373 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 AVPR1BP47901 424 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 RIOX2Q8IUF8 465 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 FAM13CQ8NE31 585 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ZMIZ2Q8NF64 920 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 L2HGDHQ9H9P8 463 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ENY2Q9NPA8 101 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PDP1Q9P0J1 537 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 FSBPO95073 299 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 UNC5CO95185 931 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SDHAF4Q5VUM1 108 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SAGE2PA6NJ88 616 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SLITRK3O94933 977 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC35G6P0C7Q6 338 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 CCR10P46092 362 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 RPL5P46777 297 aaKnown RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 TDRPQ86YL5 185 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 LPPQ93052 612 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 TBC1D10AQ9BXI6 508 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 NRG1Q02297 640 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 NAE1Q13564 534 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 DCLRE1AQ6PJP8 1040 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 OR8H1Q8NGG4 311 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 HPF1Q9NWY4 346 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 TRAF6Q9Y4K3 522 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 NME6O75414 186 aaPredicted RBP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 LINGO3P0C6S8 592 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 GLRA2P23416 452 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 HSD11B1P28845 292 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 SEPHS1P49903 392 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 TAS2R50P59544 299 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 PCBP1Q15365 356 aaKnown RBP eCLIP5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 ANKZF1Q9H8Y5 726 aa5.74□□□□□ -1.49
SRGAP1-201ENST00000355086 IQCF5A8MTL0 148 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms