RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PATL1Q86TB9 770 aaKnown RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 NSMCE2Q96MF7 247 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 GORASP1Q9BQQ3 440 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 TMLHEQ9NVH6 421 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 CDK5RAP2Q96SN8 1893 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 TCRBV5S1A1TA0A578 114 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 ANKRD66B4E2M5 251 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 MAFKO60675 156 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 KCNH1O95259 989 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 VIPR1P32241 457 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 CHI3L1P36222 383 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 ERVK-21P61565 698 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 SPRED3Q2MJR0 410 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 CAPN13Q6MZZ7 669 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 LRRTM3Q86VH5 581 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 ZC3HC1Q86WB0 502 aaKnown RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 CLEC4FQ8N1N0 589 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 AUTS2Q8WXX7 1259 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 TOP1MTQ969P6 601 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 TNKS2Q9H2K2 1166 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 MUC13Q9H3R2 512 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 IL36AQ9UHA7 158 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 MRPS17Q9Y2R5 130 aaKnown RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 PCDHGA3Q9Y5H0 932 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 ANKDD1BA6NHY2 528 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 DLGAP3O95886 979 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 UROSP10746 265 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 TCN1P20061 433 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 PPIBP23284 216 aaKnown RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 PRKG2Q13237 762 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 FAM98BQ52LJ0 330 aaKnown RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 PIK3R6Q5UE93 754 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 AAGABQ6PD74 315 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 TPRG1Q6ZUI0 275 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 ZNF438Q7Z4V0 828 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 R3HCC1LQ7Z5L2 792 aaKnown RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 SYT12Q8IV01 421 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 CYP4X1Q8N118 509 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 CNTD1Q8N815 330 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 C2CD4AQ8NCU7 369 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 SUN5Q8TC36 379 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 ARNTL2Q8WYA1 636 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 KLHL32Q96NJ5 620 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 HOPXQ9BPY8 73 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-201ENST00000350148 MECRQ9BV79 373 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 COG4Q9H9E3 785 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 SELENONQ9NZV5 590 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 FBXL21Q9UKT6 434 aa12.07□□□□□ -0.48
SMAD9-201ENST00000350148 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 ECHS1P30084 290 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 CCNFP41002 786 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 AKR1D1P51857 326 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 MSS51Q4VC12 460 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 OR6K2Q8NGY2 324 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 ABHD8Q96I13 439 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 ZSCAN5AQ9BUG6 496 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 KLHL4Q9C0H6 718 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 ARMCX1Q9P291 453 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 NPEPPSL1A6NEC2 478 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 TRIM38O00635 465 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 STC2O76061 302 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 CNTN5O94779 1100 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 HSD17B2P37059 387 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 EVA1BQ9NVM1 165 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 PNPOQ9NVS9 261 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 GREB1LQ9C091 1923 aaPredicted RBP12.06□□□□□ -0.48
SMAD9-201ENST00000350148 DPPA5A6NC42 116 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 DRGXA6NNA5 263 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 FAM155AB1AL88 458 aaPredicted RBP12.06□□□□□ -0.48
SMAD9-201ENST00000350148 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
SMAD9-201ENST00000350148 FAM72CH0Y354 149 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 STK16O75716 305 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 FAM72AQ5TYM5 149 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 FAM72DQ6L9T8 149 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 C22orf39Q6P5X5 142 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 DOK6Q6PKX4 331 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 SCD5Q86SK9 330 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 FAM72BQ86X60 149 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 FSTL5Q8N475 847 aaPredicted RBP12.06□□□□□ -0.48
SMAD9-201ENST00000350148 AGAP2Q99490 1192 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 ZDHHC7Q9NXF8 308 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 SLC27A6Q9Y2P4 619 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 TDRKHQ9Y2W6 561 aaKnown RBP12.06□□□□□ -0.48
SMAD9-201ENST00000350148 SCN4AP35499 1836 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 TEX28O15482 410 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 WDR47O94967 919 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 PROCP04070 461 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 PIK3R1P27986 724 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 MTHFRP42898 656 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 SLC10A2Q12908 348 aaPredicted RBP12.06□□□□□ -0.48
SMAD9-201ENST00000350148 BNIP1Q12981 228 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 USP4Q13107 963 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 CYP4Z1Q86W10 505 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 GATA5Q9BWX5 397 aaPredicted RBP12.06□□□□□ -0.48
SMAD9-201ENST00000350148 CCDC90BQ9GZT6 254 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 MAGEE1Q9HCI5 957 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 CCDC167Q9P0B6 97 aa12.06□□□□□ -0.48
SMAD9-201ENST00000350148 DYRK3O43781 588 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 EPHX1P07099 455 aa12.05□□□□□ -0.48
SMAD9-201ENST00000350148 FASP25445 335 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms