RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 KAT7O95251 611 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 THOP1P52888 689 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 MPP1Q00013 466 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 LINC00471Q8N535 108 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 EDEM1Q92611 657 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 RAD51AP1Q96B01 352 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 CALML5Q9NZT1 146 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 TRPV2Q9Y5S1 764 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 SPATA31A3Q5VYP0 1347 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 hCG_1818297A0A087WSY0 165 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 NOTOA8MTQ0 251 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 FFAR3O14843 346 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 GPR42O15529 346 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 HSD17B12Q53GQ0 312 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 KCNK18Q7Z418 384 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 SNX20Q7Z614 316 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 ADGRG6Q86SQ4 1221 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 CMTR2Q8IYT2 770 aaKnown RBP19.25■□□□□ 0.67
HDAC4-201ENST00000345617 SLC27A6Q9Y2P4 619 aa19.25■□□□□ 0.67
HDAC4-201ENST00000345617 USP17L7P0C7H9 530 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 GSTT2P0CG29 244 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 TPTEP56180 551 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 POU5F1Q01860 360 aaKnown RBP19.24■□□□□ 0.67
HDAC4-201ENST00000345617 RASGEF1CQ8N431 466 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 CEP76Q8TAP6 659 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 GTPBP2Q9BX10 602 aaKnown RBP19.24■□□□□ 0.67
HDAC4-201ENST00000345617 LRTM1Q9HBL6 345 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 ARPC4-TTLL3A0A0A6YYG9 625 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 SRPRAP08240 638 aaKnown RBP19.24■□□□□ 0.67
HDAC4-201ENST00000345617 BACE1P56817 501 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 ZBTB8BQ8NAP8 495 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-201ENST00000345617 AP2M1Q96CW1 435 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 LGR4Q9BXB1 951 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 PCDHB1Q9Y5F3 818 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 STYK1Q6J9G0 422 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 TIFAQ96CG3 184 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 RBMX2Q9Y388 322 aaKnown RBP19.24■□□□□ 0.67
HDAC4-201ENST00000345617 RPL36Q9Y3U8 105 aaKnown RBP19.24■□□□□ 0.67
HDAC4-201ENST00000345617 LMO7Q8WWI1 1683 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 LAPTM5Q13571 262 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 ZYG11AQ6WRX3 759 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 TMEM109Q9BVC6 243 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 EGFL7Q9UHF1 273 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 TNFRSF11BO00300 401 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 OR10H5Q8NGA6 315 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 OR4C6Q8NH72 309 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 UROC1Q96N76 676 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 NMUR2Q9GZQ4 415 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF510Q9Y2H8 683 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 ABHD14A-ACY1A0A1B0GW23 586 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 RP2O75695 350 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 C16orf46Q6P387 395 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 RANBP3Q9H6Z4 567 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-201ENST00000345617 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 ABCA11PQ4W5N1 156 aa19.24■□□□□ 0.67
HDAC4-201ENST00000345617 LCP2Q13094 533 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 ELP3Q9H9T3 547 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 SLCO1B3Q9NPD5 702 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 FBXO9Q9UK97 447 aaPredicted RBP19.23■□□□□ 0.67
HDAC4-201ENST00000345617 PPIEQ9UNP9 301 aaKnown RBP19.23■□□□□ 0.67
HDAC4-201ENST00000345617 N6AMT1Q9Y5N5 214 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 UGT1A9O60656 530 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 UGT1A6P19224 532 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 UGT1A1P22309 533 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 UGT1A4P22310 534 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 UGT1A3P35503 534 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 SLC15A1P46059 708 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 RNF157Q96PX1 679 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 CEP41Q9BYV8 373 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 ATXN3LQ9H3M9 355 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 UGT1A7Q9HAW7 530 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 UGT1A10Q9HAW8 530 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 UGT1A8Q9HAW9 530 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF208O43345 1280 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 DNAJB5O75953 348 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 SULT2A1Q06520 285 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 KLHL35Q6PF15 583 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 TMEM110Q86TL2 294 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 IQCKQ8N0W5 287 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 NTRK3Q16288 839 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 ZNF433Q8N7K0 673 aaPredicted RBP19.23■□□□□ 0.67
HDAC4-201ENST00000345617 HPF1Q9NWY4 346 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 GJB6O95452 261 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 CCSAPQ6IQ19 270 aaPredicted RBP19.23■□□□□ 0.67
HDAC4-201ENST00000345617 PCDHGC3Q9UN70 934 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 CEMIPQ8WUJ3 1361 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 UGT2B4P06133 528 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 AQP4P55087 323 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 LGI2Q8N0V4 545 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 COPS4Q9BT78 406 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 MYOZ2Q9NPC6 264 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 PIK3C2BO00750 1634 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 ZFAND2BQ8WV99 257 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 TMEM134Q9H6X4 195 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 PCDH10Q9P2E7 1040 aa19.23■□□□□ 0.67
HDAC4-201ENST00000345617 M0R036 132 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 RAPSNQ13702 412 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 IQCCQ4KMZ1 466 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 MPPE1Q53F39 396 aa19.22■□□□□ 0.67
HDAC4-201ENST00000345617 NXPE2Q96DL1 559 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms