RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 TRAM1L1Q8N609 369 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 SLC37A2Q8TED4 501 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 SNRNP27Q8WVK2 155 aaKnown RBP11.09□□□□□ -0.63
C9orf85-201ENST00000334731 HTR3CQ8WXA8 447 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 GLYATL1Q969I3 302 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 OXNAD1Q96HP4 312 aaPredicted RBP11.09□□□□□ -0.63
C9orf85-201ENST00000334731 CALR3Q96L12 384 aaKnown RBP11.09□□□□□ -0.63
C9orf85-201ENST00000334731 MRGPRX2Q96LB1 330 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 QKIQ96PU8 341 aaKnown RBP eCLIP11.09□□□□□ -0.63
C9orf85-201ENST00000334731 HERPUD2Q9BSE4 406 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 LACRTQ9GZZ8 138 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 OR2AG1Q9H205 316 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 KCNK4Q9NYG8 393 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 KLHL8Q9P2G9 620 aaPredicted RBP11.09□□□□□ -0.63
C9orf85-201ENST00000334731 ACSL6Q9UKU0 697 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 KCNK6Q9Y257 313 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 ADGRG1Q9Y653 693 aa11.09□□□□□ -0.63
C9orf85-201ENST00000334731 SMG1Q96Q15 3661 aaKnown RBP11.08□□□□□ -0.63
C9orf85-201ENST00000334731 A6NCN8 305 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 BTNL10A8MVZ5 291 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 F5H423 210 aaPredicted RBP11.08□□□□□ -0.64
C9orf85-201ENST00000334731 APOC4-APOC2K7ER74 178 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 CHUKO15111 745 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 ATXN7O15265 892 aaPredicted RBP11.08□□□□□ -0.64
C9orf85-201ENST00000334731 SNX2O60749 519 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 APOC2P02655 101 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 MPSTP25325 297 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
C9orf85-201ENST00000334731 HMGCLP35914 325 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 CHRNA4P43681 627 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 CLCNKAP51800 687 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 LIMK2P53671 638 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 COPS2P61201 443 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 VAC14Q08AM6 782 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 XRCC4Q13426 336 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 ZNF761Q86XN6 746 aaPredicted RBP11.08□□□□□ -0.64
C9orf85-201ENST00000334731 TTC30BQ8N4P2 665 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 SLC25A41Q8N5S1 370 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 RCBTB1Q8NDN9 531 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 OR4D9Q8NGE8 314 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 USP7Q93009 1102 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 SLC38A3Q99624 504 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 TRABDQ9H4I3 376 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 C10orf88Q9H8K7 445 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 BPIFA1Q9NP55 256 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 SARS2Q9NP81 518 aaKnown RBP11.08□□□□□ -0.64
C9orf85-201ENST00000334731 SLC23A2Q9UGH3 650 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 TRHDEQ9UKU6 1024 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 TMPRSS11EQ9UL52 423 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 EFR3BQ9Y2G0 817 aa11.08□□□□□ -0.64
C9orf85-201ENST00000334731 PRAMEF33A0A0G2JMD5 474 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 GPR89AB7ZAQ6 455 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 C9orf172C9J069 976 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 K7ENP7 123 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 HGSO14964 777 aaPredicted RBP11.07□□□□□ -0.64
C9orf85-201ENST00000334731 PJA2O43164 708 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 EFSO43281 561 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 PRAMEF10O60809 474 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 MTX2O75431 263 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 IPO7O95373 1038 aaKnown RBP11.07□□□□□ -0.64
C9orf85-201ENST00000334731 GPR89BP0CG08 455 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 CCL4P13236 92 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 F3P13726 295 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 CTNNA2P26232 953 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 RBL1P28749 1068 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 CSF2RBP32927 897 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 MAPK10P53779 464 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 NAP1L1P55209 391 aaKnown RBP11.07□□□□□ -0.64
C9orf85-201ENST00000334731 GPLD1P80108 840 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 MPP3Q13368 585 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 NFATC2Q13469 925 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 TRA2AQ13595 282 aaKnown RBP eCLIP11.07□□□□□ -0.64
C9orf85-201ENST00000334731 TGIF1Q15583 401 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 SLC1A5Q15758 541 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 ATP13A5Q4VNC0 1218 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 KHDC1Q4VXA5 237 aaKnown RBP11.07□□□□□ -0.64
C9orf85-201ENST00000334731 TMEM71Q6P5X7 295 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 INO80CQ6PI98 192 aaPredicted RBP11.07□□□□□ -0.64
C9orf85-201ENST00000334731 PCSK4Q6UW60 755 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 LRRC57Q8N9N7 239 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 LSM14AQ8ND56 463 aaKnown RBP11.07□□□□□ -0.64
C9orf85-201ENST00000334731 ACRBPQ8NEB7 543 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 IPMKQ8NFU5 416 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 ACTL9Q8TC94 416 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 DTX3LQ8TDB6 740 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 CCDC74BQ96LY2 380 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 PLEKHG4BQ96PX9 1271 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 DPYSL5Q9BPU6 564 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 OSBPL8Q9BZF1 889 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 B3GNT4Q9C0J1 378 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 GRPEL1Q9HAV7 217 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 IL26Q9NPH9 171 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 PRDM8Q9NQV8 689 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 KLC4Q9NSK0 619 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 FOXJ2Q9P0K8 574 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 AKAP7Q9P0M2 348 aaPredicted RBP11.07□□□□□ -0.64
C9orf85-201ENST00000334731 IL17CQ9P0M4 197 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 TMEM9Q9P0T7 183 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 PDP2Q9P2J9 529 aa11.07□□□□□ -0.64
C9orf85-201ENST00000334731 KIR2DS5A0A0G2JLQ3 304 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms