RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TMEM98Q9Y2Y6 226 aa15.77■□□□□ 0.12
PDGFB-201ENST00000331163 CACNA1HO95180 2353 aa15.77■□□□□ 0.11
PDGFB-201ENST00000331163 PFDN1O60925 122 aa15.77■□□□□ 0.11
PDGFB-201ENST00000331163 MMP2P08253 660 aa15.77■□□□□ 0.11
PDGFB-201ENST00000331163 ANKRD54Q6NXT1 300 aa15.77■□□□□ 0.11
PDGFB-201ENST00000331163 ZC3HC1Q86WB0 502 aaKnown RBP15.77■□□□□ 0.11
PDGFB-201ENST00000331163 ZNF683Q8IZ20 524 aa15.77■□□□□ 0.11
PDGFB-201ENST00000331163 LINGO1Q96FE5 620 aa15.77■□□□□ 0.11
PDGFB-201ENST00000331163 ZNF184Q99676 751 aaPredicted RBP15.77■□□□□ 0.11
PDGFB-201ENST00000331163 LRRC3Q9BY71 257 aa15.77■□□□□ 0.11
PDGFB-201ENST00000331163 TAS2R1Q9NYW7 299 aa15.77■□□□□ 0.11
PDGFB-201ENST00000331163 TDRKHQ9Y2W6 561 aaKnown RBP15.77■□□□□ 0.11
PDGFB-201ENST00000331163 CFLARO15519 480 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 CDK14O94921 469 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 LINC00271P0C7V0 271 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 LIMK2P53671 638 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 MLLT1Q03111 559 aaPredicted RBP15.76■□□□□ 0.11
PDGFB-201ENST00000331163 SULT2A1Q06520 285 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 PRKG2Q13237 762 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 AGAP9Q5VTM2 703 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 RGS9BPQ6ZS82 235 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 GPR149Q86SP6 731 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 WDR75Q8IWA0 830 aaKnown RBP15.76■□□□□ 0.11
PDGFB-201ENST00000331163 FRMD1Q8N878 549 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 FBXO27Q8NI29 283 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 HEXDCQ8WVB3 486 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 MGME1Q9BQP7 344 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 NUF2Q9BZD4 464 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 TPSD1Q9BZJ3 242 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 IL36AQ9UHA7 158 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.76■□□□□ 0.11
PDGFB-201ENST00000331163 NPEPPSL1A6NEC2 478 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 PGLSO95336 258 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 ZNF7P17097 686 aaPredicted RBP15.76■□□□□ 0.11
PDGFB-201ENST00000331163 CCNG1P51959 295 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 CCDC15Q0P6D6 951 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 TMEM135Q86UB9 458 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 FSTL5Q8N475 847 aaPredicted RBP15.76■□□□□ 0.11
PDGFB-201ENST00000331163 STYXQ8WUJ0 223 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 ELMO1Q92556 727 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 COPS8Q99627 209 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 FAM83DQ9H4H8 585 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 LHX3Q9UBR4 397 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 C16orf96A6NNT2 1141 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 PDZK1P1A8MUH7 402 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 SERPIND1P05546 499 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 NFKBIAP25963 317 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 DDX6P26196 483 aaKnown RBP eCLIP15.76■□□□□ 0.11
PDGFB-201ENST00000331163 RPL10P27635 214 aaKnown RBP15.76■□□□□ 0.11
PDGFB-201ENST00000331163 TSNQ15631 228 aaKnown RBP15.76■□□□□ 0.11
PDGFB-201ENST00000331163 ZNF77Q15935 545 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 ADCK2Q7Z695 626 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 TERB1Q8NA31 727 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 SP7Q8TDD2 431 aaPredicted RBP15.76■□□□□ 0.11
PDGFB-201ENST00000331163 CXorf40AQ8TE69 158 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 PYCR2Q96C36 320 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 ULK4Q96C45 1275 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 NSMCE3Q96MG7 304 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 PNPOQ9NVS9 261 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 NDE1Q9NXR1 346 aa15.76■□□□□ 0.11
PDGFB-201ENST00000331163 LRRC14BA6NHZ5 514 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 FCHO1O14526 889 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 MID1O15344 667 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 CCNT2O60583 730 aaKnown RBP15.75■□□□□ 0.11
PDGFB-201ENST00000331163 PEX11BO96011 259 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 HOXC13P31276 330 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 GALK1P51570 392 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 KCTD11Q693B1 232 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 PIWIL4Q7Z3Z4 852 aaKnown RBP15.75■□□□□ 0.11
PDGFB-201ENST00000331163 DEFB123Q8N688 67 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 PYDC1Q8WXC3 89 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 SH3KBP1Q96B97 665 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 MTBPQ96DY7 904 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 RNF31Q96EP0 1072 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 MED8Q96G25 268 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 MOCS1Q9NZB8 636 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 NCKIPSDQ9NZQ3 722 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 DCDC2Q9UHG0 476 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 CFAP99D6REC4 459 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 LDB2O43679 373 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 PGM3O95394 542 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 KLF8O95600 359 aaPredicted RBP15.75■□□□□ 0.11
PDGFB-201ENST00000331163 HOXB2P14652 356 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 IL12RB1P42701 662 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 ADGRE1Q14246 886 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 AFTPHQ6ULP2 937 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 OR13J1Q8NGT2 312 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 SNRNP27Q8WVK2 155 aaKnown RBP15.75■□□□□ 0.11
PDGFB-201ENST00000331163 TSPAN17Q96FV3 270 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 OLFM1Q99784 485 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 KIFC1Q9BW19 673 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 NMUR2Q9GZQ4 415 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 FBXL12Q9NXK8 326 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 SARDHQ9UL12 918 aa15.75■□□□□ 0.11
PDGFB-201ENST00000331163 C9JVG2 144 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 UBXN8O00124 270 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 FFAR3O14843 346 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 GPR42O15529 346 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 RFPL1O75677 317 aa15.74■□□□□ 0.11
PDGFB-201ENST00000331163 LYNP07948 512 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms