RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 IFRD1O00458 451 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 STX7O15400 261 aaKnown RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 B4GALT4O60513 344 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 NOS1APO75052 506 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 ARHGEF15O94989 841 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 SEMA3DO95025 777 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 F9P00740 461 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CYP11A1P05108 521 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 ENPP1P22413 925 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 GGT5P36269 586 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CCR10P46092 362 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CRADDP78560 199 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 IMPG1Q17R60 797 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 FAM83EQ2M2I3 478 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 FAM171BQ6P995 826 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 LAYNQ6UX15 382 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 STK32CQ86UX6 486 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 FBXL6Q8N531 539 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 TXNDC5Q8NBS9 432 aaKnown RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 ST13P5Q8NFI4 369 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 OR5H6Q8NGV6 325 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 MCOLN3Q8TDD5 553 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 KCTD4Q8WVF5 259 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 TMEM176AQ96HP8 235 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 C8orf48Q96LL4 319 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 PHOX2BQ99453 314 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 HAPLN2Q9GZV7 340 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 POLR3FQ9H1D9 316 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 OSBPL2Q9H1P3 480 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 SOX17Q9H6I2 414 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 MAGIXQ9H6Y5 334 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 IARS2Q9NSE4 1012 aaKnown RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 ADPRHL2Q9NX46 363 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 EHD3Q9NZN3 535 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 LEF1Q9UJU2 399 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 DNMT3LQ9UJW3 386 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 FEM1BQ9UK73 627 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 TMX2Q9Y320 296 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 LYVE1Q9Y5Y7 322 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 A0A1W2PQ72 361 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 hCG_2039718K7EN88 272 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 EEF2KO00418 725 aaKnown RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 NCAM2O15394 837 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 SNX2O60749 519 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 ZNF780AO75290 641 aaPredicted RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 EFNA1P20827 205 aaPredicted RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 ATICP31939 592 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 RACK1P63244 317 aaKnown RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 ORC1Q13415 861 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 DDR2Q16832 855 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 FBXO43Q4G163 708 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 SPANXN2Q5MJ10 180 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 OTUD3Q5T2D3 398 aaPredicted RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 AGAP9Q5VTM2 703 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 KCTD11Q693B1 232 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 APOBEC3HQ6NTF7 200 aaKnown RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 HIPK1Q86Z02 1210 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 KLHDC8BQ8IXV7 354 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 OR5K1Q8NHB7 308 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 GPRASP2Q96D09 838 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 PDLIM5Q96HC4 596 aaKnown RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 MAP6Q96JE9 813 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 RNF145Q96MT1 663 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 CSPG4P5Q96PW8 444 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 AGAP2Q99490 1192 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 C11orf84Q9BUA3 381 aaPredicted RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 C2orf49Q9BVC5 232 aaPredicted RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 ITPAQ9BY32 194 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 AMBRA1Q9C0C7 1298 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 C3orf14Q9HBI5 128 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 ACOT13Q9NPJ3 140 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 FAM49BQ9NUQ9 324 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 TJP2Q9UDY2 1190 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 USP3Q9Y6I4 520 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 WDR81Q562E7 1941 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 A0A075B6Q4 140 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 OR2A25A4D2G3 310 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 TMEM233B4DJY2 109 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 ANGPTL1O95841 491 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 TNNC2P02585 160 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 SUPT20HL2P0C7V6 817 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 ACADMP11310 421 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 HOXB1P14653 301 aaPredicted RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 HDCP19113 662 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 CAPN3P20807 821 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 HLA-DMAP28067 261 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 CD6P30203 668 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 TGFBR2P37173 567 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 HNF4AP41235 474 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 HTR2BP41595 481 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 IL12RB1P42701 662 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 SLC15A1P46059 708 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 PPP3CCP48454 512 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 SEPHS1P49903 392 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 FCGRTP55899 365 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 HUNKP57058 714 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 FKBP1AP62942 108 aaKnown RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 UBXN2AP68543 259 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 GPLD1P80108 840 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms