RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	DEC1	Q9P2X7	70 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	SLCO3A1	Q9UIG8	710 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	MYO10	Q9HD67	2058 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	LAMB2	P55268	1798 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	HS6ST1	O60243	411 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	MAT2A	P31153	395 aa	Known RBP	11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	AGTR2	P50052	363 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	CCT8	P50990	548 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	DAB2	P98082	770 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	CCDC15	Q0P6D6	951 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	MTA1	Q13330	715 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	WLS	Q5T9L3	541 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	TMEM173	Q86WV6	379 aa	Predicted RBP	11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	KLHDC9	Q8NEP7	349 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	AP2M1	Q96CW1	435 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	RMND5A	Q9H871	391 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	RMI1	Q9H9A7	625 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	EBF2	Q9HAK2	575 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	EXOSC4	Q9NPD3	245 aa	Known RBP	11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	MTF2	Q9Y483	593 aa	Predicted RBP	11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	SLC22A3	O75751	556 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	CLTB	P09497	229 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	CHRNA6	Q15825	494 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	SMYD5	Q6GMV2	418 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	FBXO27	Q8NI29	283 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	DACH2	Q96NX9	599 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	FAM83D	Q9H4H8	585 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	DOCK3	Q8IZD9	2030 aa		11.74	□□□□□ -0.53
DDR1-223	ENST00000324771	TRIM38	O00635	465 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	TRAFD1	O14545	582 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	FGF18	O76093	207 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	XRCC1	P18887	633 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	SPESP1	Q6UW49	350 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	P3H2	Q8IVL5	708 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	BBS7	Q8IWZ6	715 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	PTCD2	Q8WV60	388 aa	Known RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	DACT3	Q96B18	629 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	OR52E6	Q96RD3	313 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	KIFC1	Q9BW19	673 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	MTG2	Q9H4K7	406 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	VPS51	Q9UID3	782 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	PPM1H	Q9ULR3	514 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	STK16	O75716	305 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	OTC	P00480	354 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	THOP1	P52888	689 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	NTHL1	P78549	312 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	SCAMP4	Q969E2	229 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	COL26A1	Q96A83	441 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	FEM1C	Q96JP0	617 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	MTERF1	Q99551	399 aa	Known RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	EBPL	Q9BY08	206 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	PNPLA8	Q9NP80	782 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	SIRPG	Q9P1W8	387 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	INSL5	Q9Y5Q6	135 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	ATXN2	Q99700	1313 aa	Known RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	HLA-E	P13747	358 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	SPAM1	P38567	509 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	CDKN1C	P49918	316 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	LCP2	Q13094	533 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	GRAMD4	Q6IC98	578 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	TMEM135	Q86UB9	458 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	CILP2	Q8IUL8	1156 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	CFAP206	Q8IYR0	622 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	PXYLP1	Q8TE99	480 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	UTP15	Q8TED0	518 aa	Known RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	ASB2	Q96Q27	587 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	RHBG	Q9H310	441 aa		11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	THG1L	Q9NWX6	298 aa	Known RBP	11.73	□□□□□ -0.53
DDR1-223	ENST00000324771	ZNF840P	A6NDX5	716 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	TEX28	O15482	410 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	ECI2	O75521	394 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	IL5RA	Q01344	420 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	PQLC1	Q8N2U9	271 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	LZIC	Q8WZA0	190 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	ZFYVE19	Q96K21	471 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	RTKN	Q9BST9	563 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	S100A14	Q9HCY8	104 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	OSER1	Q9NX31	292 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	COPG1	Q9Y678	874 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	UTRN	P46939	3433 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	ADAMTS4	O75173	837 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	FAM58BP	P0C7Q3	252 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	MAPK8	P45983	427 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	NEK2	P51955	445 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	DYNC1I2	Q13409	638 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	FAM98B	Q52LJ0	330 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	LY6G5C	Q5SRR4	150 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	C16orf87	Q6PH81	154 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	ALKAL1	Q6UXT8	129 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	OLIG1	Q8TAK6	271 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	OLFM1	Q99784	485 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	ZCWPW2	A0A1B0GU75	182 aa		11.72	□□□□□ -0.53

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