RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PER2O15055 1255 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 CD52P31358 61 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 ADRA1BP35368 520 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 PTPN9P43378 593 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 ACAP2Q15057 778 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 RASSF5Q8WWW0 418 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 SLC30A4O14863 429 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 DNTTP04053 509 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 CERS6Q6ZMG9 384 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 SLC4A11Q8NBS3 891 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 MNTQ99583 582 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 ERVK-5Q9HDB9 667 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 B4GALT4O60513 344 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 MMP8P22894 467 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 RHBDL3P58872 404 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 BNIP1Q12981 228 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 RHBDF2Q6PJF5 856 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 SPPL2BQ8TCT7 592 aa20.9■□□□□ 0.94
RNF40-201ENST00000324685 MAP2K5Q13163 448 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 ESRP1Q6NXG1 681 aaKnown RBP20.89■□□□□ 0.94
RNF40-201ENST00000324685 LLGL2Q6P1M3 1020 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 SRFBP1Q8NEF9 429 aaKnown RBP20.89■□□□□ 0.94
RNF40-201ENST00000324685 LPGAT1Q92604 370 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 ROPN1LQ96C74 230 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 C11orf24Q96F05 449 aaPredicted RBP20.89■□□□□ 0.94
RNF40-201ENST00000324685 TCF25Q9BQ70 676 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 C22orf31O95567 290 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 IFNW1P05000 195 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 CCNCP24863 283 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 RPS9P46781 194 aaKnown RBP20.89■□□□□ 0.94
RNF40-201ENST00000324685 LIPEQ05469 1076 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 SUZ12Q15022 739 aaKnown RBP20.89■□□□□ 0.94
RNF40-201ENST00000324685 PTPN20Q4JDL3 420 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 IQCKQ8N0W5 287 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 OR4K2Q8NGD2 314 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 NXNL1Q96CM4 212 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 PPM1MQ96MI6 270 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 BHLHE41Q9C0J9 482 aaPredicted RBP20.89■□□□□ 0.94
RNF40-201ENST00000324685 FAM105AQ9NUU6 356 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 IMP3Q9NV31 184 aaKnown RBP20.89■□□□□ 0.94
RNF40-201ENST00000324685 MIOSQ9NXC5 875 aa20.89■□□□□ 0.94
RNF40-201ENST00000324685 UGCGQ16739 394 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 DCST1Q5T197 706 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 EEF1DP3Q658K8 133 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 TRPV5Q9NQA5 729 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 IKZF2Q9UKS7 526 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 RIIAD1A6NNX1 92 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 MFSD11O43934 449 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 STK16O75716 305 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 POU5F1Q01860 360 aaKnown RBP20.89■□□□□ 0.93
RNF40-201ENST00000324685 EGFLAMQ63HQ2 1017 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 TSEN15Q8WW01 171 aaKnown RBP20.89■□□□□ 0.93
RNF40-201ENST00000324685 HTRA1Q92743 480 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 DIRAS2Q96HU8 199 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 PHF12Q96QT6 1004 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 UNC93B1Q9H1C4 597 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 KCNN2Q9H2S1 579 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 R3HDM2Q9Y2K5 976 aaKnown RBP20.89■□□□□ 0.93
RNF40-201ENST00000324685 REXO2Q9Y3B8 237 aaKnown RBP20.89■□□□□ 0.93
RNF40-201ENST00000324685 NDST3O95803 873 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 SAGP10523 405 aaPredicted RBP20.89■□□□□ 0.93
RNF40-201ENST00000324685 PBX1P40424 430 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 PNLIPRP1P54315 467 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 ATP13A5Q4VNC0 1218 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 C6orf52Q5T4I8 152 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 ZBTB46Q86UZ6 589 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 RALGPS2Q86X27 583 aaPredicted RBP20.89■□□□□ 0.93
RNF40-201ENST00000324685 IFNLR1Q8IU57 520 aaPredicted RBP20.89■□□□□ 0.93
RNF40-201ENST00000324685 RNF31Q96EP0 1072 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 TNKS2Q9H2K2 1166 aa20.89■□□□□ 0.93
RNF40-201ENST00000324685 PHPT1Q9NRX4 125 aaPredicted RBP20.89■□□□□ 0.93
RNF40-201ENST00000324685 KCNU1A8MYU2 1149 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 H3BM21 787 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 AP2A1O95782 977 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 S100A6P06703 90 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 ITGA7Q13683 1181 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 ZBTB6Q15916 424 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 GPR142Q7Z601 462 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 SLC43A3Q8NBI5 491 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 MIR1-1HGQ9H1L0 117 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 SMURF2Q9HAU4 748 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 KIF20BQ96Q89 1820 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 PLIN3O60664 434 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 SIM2Q14190 667 aaPredicted RBP20.88■□□□□ 0.93
RNF40-201ENST00000324685 ZZZ3Q8IYH5 903 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 CENPNQ96H22 339 aaPredicted RBP20.88■□□□□ 0.93
RNF40-201ENST00000324685 GPER1Q99527 375 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 ANGPTL1O95841 491 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 RHOQP17081 205 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 LIMK2P53671 638 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 PTP4A2Q12974 167 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 NDUFA9Q16795 377 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 RNF19BQ6ZMZ0 732 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 RASSF6Q6ZTQ3 369 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 OTOP3Q7RTS5 596 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 KREMEN1Q96MU8 473 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 HOXA10P31260 410 aaPredicted RBP20.88■□□□□ 0.93
RNF40-201ENST00000324685 SLC1A5Q15758 541 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 CXorf57Q6NSI4 855 aaKnown RBP20.88■□□□□ 0.93
RNF40-201ENST00000324685 VSTM1Q6UX27 236 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms