RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CLK4Q9HAZ1 481 aaKnown RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 SAP18O00422 153 aaKnown RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 EI24O14681 340 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 AURKAO14965 403 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 TSC22D2O75157 780 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 RECQL5O94762 991 aaPredicted RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 MFN2O95140 757 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 CXCL14O95715 111 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 HAPLN1P10915 354 aaPredicted RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 MTHFRP42898 656 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 MBLAC2Q68D91 279 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 PSMA8Q8TAA3 256 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 POLR3BQ9NW08 1133 aaPredicted RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 RSL24D1Q9UHA3 163 aaKnown RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 NUP188Q5SRE5 1749 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 GLYATL1P3A0A0U1RQE8 302 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 INSIG1O15503 277 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 STK16O75716 305 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 ACRP10323 421 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 FAM124AQ86V42 546 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 LRRC49Q8IUZ0 686 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 OR7A2PQ8NGA2 310 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 SLC9A7Q96T83 725 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 UNC93B1Q9H1C4 597 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 ADPRHL2Q9NX46 363 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 MAP10Q9P2G4 905 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 RAPGEFL1Q9UHV5 662 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 CDV3Q9UKY7 258 aaKnown RBP16.36■□□□□ 0.21
CLIP4-201ENST00000320081 VPS4AQ9UN37 437 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 RP1P56715 2156 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 IRS2Q9Y4H2 1338 aa16.36■□□□□ 0.21
CLIP4-201ENST00000320081 ONECUT3O60422 494 aaPredicted RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 DIRAS1O95057 198 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 ANXA6P08133 673 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 HOXB8P17481 243 aaPredicted RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 PRKCHP24723 683 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 POLR2LP62875 67 aaKnown RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 TNK2Q07912 1038 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 SIRPB2Q5JXA9 342 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 FIBCD1Q8N539 461 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 TBC1D19Q8N5T2 526 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 CDKN2AIPNLQ96HQ2 116 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 NSUN5Q96P11 429 aaKnown RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 PKP2Q99959 881 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 OSBPL11Q9BXB4 747 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 PNPLA3Q9NST1 481 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 SNX6Q9UNH7 406 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 UPK3BL1B0FP48 263 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 UPK3BL2E5RIL1 263 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 OR6B1O95007 311 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 PRSS56P0CW18 603 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 FGF3P11487 239 aaPredicted RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 HOXA11P31270 313 aaPredicted RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 GRK3P35626 688 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 MLLT6P55198 1093 aaPredicted RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 TXNDC5Q8NBS9 432 aaKnown RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 FBXO22Q8NEZ5 403 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 DGCR14Q96DF8 476 aaKnown RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 TOR4AQ9NXH8 423 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 GNPDA1P46926 289 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 AIF1P55008 147 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 DIO3P55073 304 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 DEFA1P59665 94 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 DEFA3P59666 94 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 DEFB115Q30KQ5 88 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 NOL9Q5SY16 702 aaKnown RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 TAPT1Q6NXT6 567 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 FEM1AQ9BSK4 669 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 TRMOQ9BU70 441 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 C3orf18Q9UK00 162 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 RPL26L1Q9UNX3 145 aaKnown RBP16.35■□□□□ 0.21
CLIP4-201ENST00000320081 ACTL7AQ9Y615 435 aa16.35■□□□□ 0.21
CLIP4-201ENST00000320081 SEPT4O43236 478 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 ACAP2Q15057 778 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 DDI2Q5TDH0 399 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 ZNF549Q6P9A3 640 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 HJURPQ8NCD3 748 aaPredicted RBP16.34■□□□□ 0.21
CLIP4-201ENST00000320081 STYXQ8WUJ0 223 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 KAT2AQ92830 837 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 UROC1Q96N76 676 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 VPS35Q96QK1 796 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 LRTM1Q9HBL6 345 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 OAZ3Q9UMX2 235 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 TRIM43BA6NCK2 446 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 VPS4BO75351 444 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 MYCLP1P12525 358 aaPredicted RBP16.34■□□□□ 0.21
CLIP4-201ENST00000320081 AGTR2P50052 363 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 ST13P50502 369 aaKnown RBP16.34■□□□□ 0.21
CLIP4-201ENST00000320081 LAPTM5Q13571 262 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 TRAF7Q6Q0C0 670 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 VANGL1Q8TAA9 524 aaPredicted RBP16.34■□□□□ 0.21
CLIP4-201ENST00000320081 FCRL5Q96RD9 977 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 PTPN18Q99952 460 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 MTIF3Q9H2K0 278 aaKnown RBP16.34■□□□□ 0.21
CLIP4-201ENST00000320081 MYO5AQ9Y4I1 1855 aaKnown RBP16.34■□□□□ 0.21
CLIP4-201ENST00000320081 OR6C75A6NL08 312 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 LDB2O43679 373 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 PARP15Q460N3 678 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 TTC23Q5W5X9 447 aa16.34■□□□□ 0.21
CLIP4-201ENST00000320081 SDE2Q6IQ49 451 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms