RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 TMC3Q7Z5M5 1100 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 PTRH1Q86Y79 214 aaKnown RBP17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 CTNNBL1Q8WYA6 563 aaPredicted RBP17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 IMP4Q96G21 291 aaKnown RBP17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 STN1Q9H668 368 aaKnown RBP17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 OGFRQ9NZT2 677 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 LRRD1A4D1F6 860 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 OR5K4A6NMS3 321 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 ZNF891A8MT65 544 aaPredicted RBP17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 CHUKO15111 745 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 STK17BO94768 372 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC2A4P14672 509 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 MAP4P27816 1152 aaKnown RBP17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 GFERP55789 205 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 AP1B1Q10567 949 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 KCNAB2Q13303 367 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC9A4Q6AI14 798 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 CRTC3Q6UUV7 619 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 NPNTQ6UXI9 565 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 B4GALNT4Q76KP1 1039 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 PHYKPLQ8IUZ5 450 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 TADA1Q96BN2 335 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 RNF31Q96EP0 1072 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 ZNF830Q96NB3 372 aaPredicted RBP17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 AGAP3Q96P47 875 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 ZPBPQ9BS86 351 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 GPN2Q9H9Y4 310 aaPredicted RBP17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 MAGEE1Q9HCI5 957 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 ZNF624Q9P2J8 865 aaPredicted RBP17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 TMEM184BQ9Y519 407 aaPredicted RBP17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC30A1Q9Y6M5 507 aa17.22■□□□□ 0.35
EXOSC4-201ENST00000316052 LILRA5A6NI73 299 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 CAPN5O15484 640 aaPredicted RBP17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 MTX2O75431 263 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 PRKAR1AP10644 381 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 TYRP1P17643 537 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 XRCC1P18887 633 aaPredicted RBP17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC19A1P41440 591 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 CCR10P46092 362 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 DCDC1P59894 354 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 TLE1Q04724 770 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 PCSK7Q16549 785 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 PLA2G4EQ3MJ16 856 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 KHDC1Q4VXA5 237 aaKnown RBP17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 ZNF569Q5MCW4 686 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 NT5DC3Q86UY8 548 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 PLXDC1Q8IUK5 500 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 TRAM1L1Q8N609 369 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 SPATA22Q8NHS9 363 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC35G2Q8TBE7 412 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 GLYATL1Q969I3 302 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 ZSCAN5AQ9BUG6 496 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC25A51Q9H1U9 297 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 OSGEPL1Q9H4B0 414 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 EPB41L1Q9H4G0 881 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 SIDT1Q9NXL6 827 aaKnown RBP17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 TMPRSS11EQ9UL52 423 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 ZNF711Q9Y462 761 aa17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 PRRC2CQ9Y520 2896 aaKnown RBP17.21■□□□□ 0.35
EXOSC4-201ENST00000316052 MN1Q10571 1320 aaPredicted RBP17.21■□□□□ 0.34
EXOSC4-201ENST00000316052 SPENQ96T58 3664 aaKnown RBP17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 PRR19A6NJB7 356 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 ZNF487B1APH4 448 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 AURKAO14965 403 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 POLR1CO15160 346 aaPredicted RBP17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 DLGAP3O95886 979 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 MT-CYBP00156 380 aaPredicted RBP17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 SLC4A1P02730 911 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 C9P02748 559 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 TMEM253P0C7T8 217 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 ZNF7P17097 686 aaPredicted RBP17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 BPIP17213 487 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 OAS2P29728 719 aaKnown RBP17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 CDK18Q07002 472 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 ABHD18Q0P651 414 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 SKIDA1Q1XH10 827 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 TMEM26Q6ZUK4 368 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 ZNF547Q8IVP9 402 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 KIAA1143Q96AT1 154 aaPredicted RBP17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 C9orf72Q96LT7 481 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 CATSPER2Q96P56 530 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 OLFM3Q96PB7 478 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 XPO4Q9C0E2 1151 aaKnown RBP17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 UCK1Q9HA47 277 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 NFKBIL1Q9UBC1 381 aaPredicted RBP17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 LCMT1Q9UIC8 334 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 DNAJC16Q9Y2G8 782 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 SPO11Q9Y5K1 396 aa17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 RP1L1Q8IWN7 2480 aaPredicted RBP17.2■□□□□ 0.34
EXOSC4-201ENST00000316052 ZNF106Q9H2Y7 1883 aaKnown RBP17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 GPR89AB7ZAQ6 455 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 APOL1O14791 398 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 UBXN7O94888 489 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 VIPP01282 170 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 ANKRD34CP0C6C1 535 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 GPR89BP0CG08 455 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 BRAFP15056 766 aa17.19■□□□□ 0.34
EXOSC4-201ENST00000316052 ZNF28P17035 718 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms