RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 NT5C1B-RDH14C9J2C7 533 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 CDH3P22223 829 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 FAM189BP81408 668 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 HMGCS1Q01581 520 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 UNC93AQ86WB7 457 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 ERI1Q8IV48 349 aaKnown RBP14.49□□□□□ -0.09
PTPN9-201ENST00000306726 SYTL1Q8IYJ3 562 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 GPR21Q99679 349 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 TRHDEQ9UKU6 1024 aa14.49□□□□□ -0.09
PTPN9-201ENST00000306726 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.49□□□□□ -0.09
PTPN9-201ENST00000306726 PRSS51A0A1B0GVH4 220 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 SLC12A8A0AV02 714 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 ACOT8O14734 319 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 GPR182O15218 404 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 NTRK1P04629 796 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 CTPS1P17812 591 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 GJA8P48165 433 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 PWP1Q13610 501 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 SNX17Q15036 470 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 DCAF4L1Q3SXM0 396 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 PAGE3Q5JUK9 113 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 SLCO4A1Q96BD0 722 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 POLR3HQ9Y535 204 aaPredicted RBP14.48□□□□□ -0.09
PTPN9-201ENST00000306726 SLC30A1Q9Y6M5 507 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 A6NL46 340 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 NBNO60934 754 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 NIPSNAP2O75323 286 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 CDK9P50750 372 aaKnown RBP14.48□□□□□ -0.09
PTPN9-201ENST00000306726 OR4D2P58180 307 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 RPL38P63173 70 aaKnown RBP14.48□□□□□ -0.09
PTPN9-201ENST00000306726 PABPC1LQ4VXU2 614 aaKnown RBP14.48□□□□□ -0.09
PTPN9-201ENST00000306726 CRTC3Q6UUV7 619 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 PTERQ96BW5 349 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 C9orf16Q9BUW7 83 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 A0A1W2PQH9 124 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 GOT2P00505 430 aaKnown RBP14.48□□□□□ -0.09
PTPN9-201ENST00000306726 FYNP06241 537 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 AGXTP21549 392 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 FSHRP23945 695 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 SYT16Q17RD7 645 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 BTLAQ7Z6A9 289 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 SERINC5Q86VE9 423 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 CLYBLQ8N0X4 340 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 UBE2J2Q8N2K1 259 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 ZCCHC7Q8N3Z6 543 aaKnown RBP14.48□□□□□ -0.09
PTPN9-201ENST00000306726 C7orf57Q8NEG2 295 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 OR4K2Q8NGD2 314 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 CAPSLQ8WWF8 208 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 MRPL40Q9NQ50 206 aaKnown RBP14.48□□□□□ -0.09
PTPN9-201ENST00000306726 PRDM5Q9NQX1 630 aaPredicted RBP14.48□□□□□ -0.09
PTPN9-201ENST00000306726 SNX8Q9Y5X2 465 aa14.48□□□□□ -0.09
PTPN9-201ENST00000306726 ASCC3Q8N3C0 2202 aaKnown RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 H2AFYO75367 372 aaKnown RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 FADS2O95864 444 aaKnown RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 CST1P01037 141 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 MTHFRP42898 656 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 CLK1P49759 484 aaKnown RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 BMXP51813 675 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 NHSL2Q5HYW2 709 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 TBPL2Q6SJ96 375 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 FNDC8Q8TC99 324 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 LRRC58Q96CX6 371 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 ABHD8Q96I13 439 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 TM6SF2Q9BZW4 377 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 RUBCNLQ9H714 662 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 SMPD3Q9NY59 655 aaPredicted RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 PKP3Q9Y446 797 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 TRPV2Q9Y5S1 764 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 NADKO95544 446 aaPredicted RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 DBTP11182 482 aaKnown RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 COL6A2P12110 1019 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 ACVRL1P37023 503 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 CRYBB1P53674 252 aaPredicted RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 TIGD5Q53EQ6 642 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 MARCH8Q5T0T0 291 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 UGT3A1Q6NUS8 523 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 ZDHHC13Q8IUH4 622 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 SIDT2Q8NBJ9 832 aaKnown RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 ZNF555Q8NEP9 628 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 TSPAN17Q96FV3 270 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 EXOSC4Q9NPD3 245 aaKnown RBP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 CMTM6Q9NX76 183 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 MIOSQ9NXC5 875 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 ANKRD6Q9Y2G4 727 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 SH3BP5O60239 455 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 TBC1D4O60343 1298 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 OR1I1O60431 355 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 GRM2Q14416 872 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 CPSF6Q16630 551 aaKnown RBP eCLIP14.47□□□□□ -0.09
PTPN9-201ENST00000306726 RGS21Q2M5E4 152 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 ALFQ53S48 1182 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 FAM91A1Q658Y4 838 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 ANKS6Q68DC2 871 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 SLCO6A1Q86UG4 719 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 DACH2Q96NX9 599 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 CATSPERBQ9H7T0 1116 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 TIMMDC1Q9NPL8 285 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 KLQ9UEF7 1012 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 UTS2RQ9UKP6 389 aa14.47□□□□□ -0.09
PTPN9-201ENST00000306726 CCDC162PA2VCL2 907 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms