RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MANFP55145 182 aaKnown RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 MPP1Q00013 466 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 SUZ12Q15022 739 aaKnown RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 FAM189A2Q15884 450 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 LY6KQ17RY6 165 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 CYP2W1Q8TAV3 490 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 AP2M1Q96CW1 435 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 MYO19Q96H55 970 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 MRPS7Q9Y2R9 242 aaKnown RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 GPC6Q9Y625 555 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF99A8MXY4 864 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PER2O15055 1255 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 AKR1A1P14550 325 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 RNASEH2BQ5TBB1 312 aaKnown RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 FAM46CQ5VWP2 391 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ZBTB2Q8N680 514 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 TNFAIP8L1Q8WVP5 186 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ASB9Q96DX5 294 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PTPRHQ9HD43 1115 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 MIOSQ9NXC5 875 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 XKRYO14609 159 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 SOX10P56693 466 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 NUMA1Q14980 2115 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ATP13A5Q4VNC0 1218 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 FAM35AQ86V20 835 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 LAPTM4BQ86VI4 370 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 SRFBP1Q8NEF9 429 aaKnown RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 BTN2A3PQ96KV6 586 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 AIF1LQ9BQI0 150 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 DNAJC11Q9NVH1 559 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 TMEM9Q9P0T7 183 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PTBP2Q9UKA9 531 aaKnown RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ANKRD63C9JTQ0 380 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PRPS2P11908 318 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PEX2P28328 305 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 HSPA14Q0VDF9 509 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 USP4Q13107 963 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 AKIRIN2Q53H80 203 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 KCTD8Q6ZWB6 473 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 BANPQ8N9N5 519 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 CIB1Q99828 191 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 TTYH1Q9H313 450 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PNPOQ9NVS9 261 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF490Q9ULM2 529 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 NTRK1P04629 796 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PRR5P85299 388 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 FAM171BQ6P995 826 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 AHSA2Q719I0 299 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ARMCX6Q7L4S7 300 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 VGLL2Q8N8G2 317 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 LRRC20Q8TCA0 184 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 DNAJB3Q8WWF6 145 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 C1GALT1C1Q96EU7 318 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PRMT6Q96LA8 375 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PCDH18Q9HCL0 1135 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 UBIAD1Q9Y5Z9 338 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 TNFRSF11BO00300 401 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 KERAO60938 352 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 BANF1O75531 89 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 PIK3CBP42338 1070 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 AKR1D1P51857 326 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ATN1P54259 1190 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ZBED5Q49AG3 693 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ZC3H12AQ5D1E8 599 aaKnown RBP7.59□□□□□ -1.19
SF3B3-201ENST00000302516 DCST1Q5T197 706 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 RTL4Q6ZR62 310 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 SMIM5Q71RC9 77 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 SATL1Q86VE3 508 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 ATCAYQ86WG3 371 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 RIOX2Q8IUF8 465 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 DGKBQ9Y6T7 804 aa7.59□□□□□ -1.19
SF3B3-201ENST00000302516 AP2A2O94973 939 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 MPSTP25325 297 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 KHKP50053 298 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 CBX2Q14781 532 aaPredicted RBP7.59□□□□□ -1.2
SF3B3-201ENST00000302516 SNAPC1Q16533 368 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 PPM1LQ5SGD2 360 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 HECTD2Q5U5R9 776 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 GLYATQ6IB77 296 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 KLHL35Q6PF15 583 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 MAB21L3Q8N8X9 362 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 OR52K2Q8NGK3 314 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 CITED4Q96RK1 184 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 LGMNQ99538 433 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 C1orf21Q9H246 121 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 ATXN3LQ9H3M9 355 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 SGK2Q9HBY8 427 aa7.59□□□□□ -1.2
SF3B3-201ENST00000302516 THOP1P52888 689 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 TAS2R40P59535 323 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ADAM17P78536 824 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 LCLAT1Q6UWP7 414 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 HPS6Q86YV9 775 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 CPNE9Q8IYJ1 553 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 STYXQ8WUJ0 223 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 GLOD4Q9HC38 313 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 RAB23Q9ULC3 237 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 AQP12BA6NM10 295 aa7.58□□□□□ -1.2
SF3B3-201ENST00000302516 ZBTB11O95625 1053 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-201ENST00000302516 HTR1BP28222 390 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms