RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ST13P5Q8NFI4 369 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 CD200R1Q8TD46 325 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 KIAA1191Q96A73 305 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 MIEF2Q96C03 454 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 PHF21BQ96EK2 531 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 SLC30A3Q99726 388 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 COG4Q9H9E3 785 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ZFP14Q9HCL3 533 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ELOVL2Q9NXB9 296 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 DEC1Q9P2X7 70 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 TSPAN11A1L157 253 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 OTOL1A6NHN0 477 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 TRIM64CA6NLI5 447 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 SERPINA6P08185 405 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 TPBGLP0DKB5 382 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 SLC6A11P48066 632 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 KRT72Q14CN4 511 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ARSIQ5FYB1 569 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 LRRC73Q5JTD7 316 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 ZDHHC20Q5W0Z9 365 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 RBM12BQ8IXT5 1001 aaKnown RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 GIMAP7Q8NHV1 300 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 EXT2Q93063 718 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 NXPE3Q969Y0 559 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 LRIG1Q96JA1 1093 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 TUBB6Q9BUF5 446 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 MTG2Q9H4K7 406 aa14.14□□□□□ -0.15
C9orf3-202ENST00000297979 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-202ENST00000297979 MATN2O00339 956 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 DIAPH2O60879 1101 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 KERAO60938 352 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 C1SP09871 688 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 CYP2A6P11509 494 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-202ENST00000297979 UGT1A6P19224 532 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 UGT1A1P22309 533 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 UGT1A4P22310 534 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 CA5AP35218 305 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 UGT1A3P35503 534 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 UGT1A5P35504 534 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 VWA5B1Q5TIE3 1220 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 PTRHD1Q6GMV3 140 aaKnown RBP14.13□□□□□ -0.15
C9orf3-202ENST00000297979 TANGO2Q6ICL3 276 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 VITQ6UXI7 678 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 ATOH8Q96SQ7 321 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 HPS4Q9NQG7 708 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 ARMCX1Q9P291 453 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 GNPTGQ9UJJ9 305 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 PLA2G4CQ9UP65 541 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 TRIM33Q9UPN9 1127 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 COL4A3Q01955 1670 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 SLCO1B7G3V0H7 640 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 HDAC3O15379 428 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 HNRNPCL1O60812 293 aaKnown RBP14.13□□□□□ -0.15
C9orf3-202ENST00000297979 CTSLP07711 333 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 ZNF30P17039 623 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 IMPDH1P20839 514 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 NFKBIAP25963 317 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 ALDH18A1P54886 795 aaKnown RBP14.13□□□□□ -0.15
C9orf3-202ENST00000297979 IL2P60568 153 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 KDSRQ06136 332 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 MESP2Q0VG99 397 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 ARHGEF7Q14155 803 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 SEL1L3Q68CR1 1132 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 EPGNQ6UW88 154 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 NXPE1Q8N323 547 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 STAG3L4Q8TBR4 150 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 L3HYPDHQ96EM0 354 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 BOCQ9BWV1 1114 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 SHCBP1LQ9BZQ2 653 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 LRMDAQ9H2I8 198 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 SARS2Q9NP81 518 aaKnown RBP14.13□□□□□ -0.15
C9orf3-202ENST00000297979 ARL8BQ9NVJ2 186 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 VTI1BQ9UEU0 232 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 ZDHHC2Q9UIJ5 367 aa14.13□□□□□ -0.15
C9orf3-202ENST00000297979 KIAA1549LQ6ZVL6 1849 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 AGAP14A8MT82 685 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 IQCF5A8MTL0 148 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 UPK3BL1B0FP48 263 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 PRRT4C9JH25 899 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 UPK3BL2E5RIL1 263 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 ZSCAN9O15535 394 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-202ENST00000297979 VIPR1P32241 457 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 RASSF2P50749 326 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 CLCN7P51798 805 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 EIF4HQ15056 248 aaKnown RBP14.12□□□□□ -0.15
C9orf3-202ENST00000297979 ZNF805Q5CZA5 627 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 FRMD7Q6ZUT3 714 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 ANKRD13BQ86YJ7 626 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 ZNF366Q8N895 744 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 VPS37AQ8NEZ2 397 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 ZNF483Q8TF39 744 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-202ENST00000297979 TIFAQ96CG3 184 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 LINGO1Q96FE5 620 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 ABHD8Q96I13 439 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 EML4Q9HC35 981 aaKnown RBP14.12□□□□□ -0.15
C9orf3-202ENST00000297979 RNF112Q9ULX5 631 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 UBXN8O00124 270 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 TSPAN12O95859 305 aa14.12□□□□□ -0.15
C9orf3-202ENST00000297979 TPP2P29144 1249 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-202ENST00000297979 SPINT3P49223 89 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms