RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 XPR1Q9UBH6 696 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 PKP3Q9Y446 797 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 ARL5AQ9Y689 179 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 DPPA5A6NC42 116 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 WASH3PC4AMC7 463 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 STX7O15400 261 aaKnown RBP16.69■□□□□ 0.26
CPSF4-201ENST00000292476 PEX1O43933 1283 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 DLX3O60479 287 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 TULP3O75386 442 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 ZNF821O75541 412 aaPredicted RBP16.69■□□□□ 0.26
CPSF4-201ENST00000292476 CHRNGP07510 517 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 LINGO3P0C6S8 592 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 PSMC3P17980 439 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 OGNP20774 298 aaKnown RBP16.69■□□□□ 0.26
CPSF4-201ENST00000292476 FCARP24071 287 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 LEPRP48357 1165 aaKnown RBP16.69■□□□□ 0.26
CPSF4-201ENST00000292476 STK19P49842 368 aaPredicted RBP16.69■□□□□ 0.26
CPSF4-201ENST00000292476 NAGLUP54802 743 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 MPP1Q00013 466 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 CDC16Q13042 620 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 LSM12Q3MHD2 195 aaKnown RBP16.69■□□□□ 0.26
CPSF4-201ENST00000292476 GRAMD4Q6IC98 578 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 IZUMO2Q6UXV1 221 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 MTSS1LQ765P7 747 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 CAMK1DQ8IU85 385 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 TMEM126BQ8IUX1 230 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 ETFBKMTQ8IXQ9 262 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 AFAP1L2Q8N4X5 818 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 OR4L1Q8NH43 312 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 MAELQ96JY0 434 aaKnown RBP16.69■□□□□ 0.26
CPSF4-201ENST00000292476 NSMCE3Q96MG7 304 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 LENG8Q96PV6 779 aaPredicted RBP16.69■□□□□ 0.26
CPSF4-201ENST00000292476 TCF12Q99081 682 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 CIPCQ9C0C6 399 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 EBF3Q9H4W6 596 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 SUV39H2Q9H5I1 410 aa16.69■□□□□ 0.26
CPSF4-201ENST00000292476 SPATS2LQ9NUQ6 558 aaKnown RBP16.69■□□□□ 0.26
CPSF4-201ENST00000292476 GOLGA8TH3BQL2 631 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 BAG2O95816 211 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 SLC26A3P40879 764 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 EIF2DP41214 584 aaKnown RBP16.68■□□□□ 0.26
CPSF4-201ENST00000292476 CCNHP51946 323 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-201ENST00000292476 ZNF140P52738 457 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-201ENST00000292476 SLC12A2P55011 1212 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 GALNT1Q10472 559 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-201ENST00000292476 CTBP1Q13363 440 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 GEN1Q17RS7 908 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 TANGO2Q6ICL3 276 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 KBTBD6Q86V97 674 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 CILP2Q8IUL8 1156 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 DENND6AQ8IWF6 608 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 LSMEM2Q8N112 164 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 KYQ8NBH2 561 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 UCMAQ8WVF2 138 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 PIH1D2Q8WWB5 315 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 CDKN2AIPNLQ96HQ2 116 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 ELMO2Q96JJ3 720 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 DNAJC1Q96KC8 554 aaKnown RBP16.68■□□□□ 0.26
CPSF4-201ENST00000292476 GPR63Q9BZJ6 419 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 CATSPERZQ9NTU4 200 aa16.68■□□□□ 0.26
CPSF4-201ENST00000292476 BDP1A6H8Y1 2624 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 A0A0J9YYE9 177 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 H7C0S8 307 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 CD3EAPO15446 510 aaKnown RBP16.67■□□□□ 0.26
CPSF4-201ENST00000292476 ECI2O75521 394 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 TRBC1P01850 177 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 PIRTP0C851 137 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 LAMP2P13473 410 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 PAX7P23759 505 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 HMGCLP35914 325 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 RUNX3Q13761 415 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 CYLC2Q14093 348 aaPredicted RBP16.67■□□□□ 0.26
CPSF4-201ENST00000292476 FAM83EQ2M2I3 478 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 AARS2Q5JTZ9 985 aaKnown RBP16.67■□□□□ 0.26
CPSF4-201ENST00000292476 AGAP9Q5VTM2 703 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 ZFP1Q6P2D0 407 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 VITQ6UXI7 678 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 USP45Q70EL2 814 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 PTAR1Q7Z6K3 402 aaPredicted RBP16.67■□□□□ 0.26
CPSF4-201ENST00000292476 PDSS2Q86YH6 399 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 CEP97Q8IW35 865 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 PGAM4Q8N0Y7 254 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 MDGA1Q8NFP4 955 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 OR4K2Q8NGD2 314 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 HCAR2Q8TDS4 363 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 TBATAQ96M53 351 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 LYSMD1Q96S90 227 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 HEPHQ9BQS7 1158 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 INTS10Q9NVR2 710 aaKnown RBP16.67■□□□□ 0.26
CPSF4-201ENST00000292476 ELOVL2Q9NXB9 296 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 C6orf203Q9P0P8 240 aaPredicted RBP16.67■□□□□ 0.26
CPSF4-201ENST00000292476 SLCO3A1Q9UIG8 710 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 ZDHHC2Q9UIJ5 367 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 PPIL1Q9Y3C6 166 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 ZNF711Q9Y462 761 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 SPO11Q9Y5K1 396 aa16.67■□□□□ 0.26
CPSF4-201ENST00000292476 MYLKQ15746 1914 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 LOC100653049A0A140TA62 436 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 KRT34O76011 436 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 PDE5AO76074 875 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms