RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ARNT2Q9HBZ2 717 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 CASS4Q9NQ75 786 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 KCND1Q9NSA2 647 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 KLC4Q9NSK0 619 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 NLE1Q9NVX2 485 aaPredicted RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 TRNAU1APQ9NX07 287 aaKnown RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 SYBUQ9NX95 663 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 TAAR2Q9P1P5 351 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 RNF14Q9UBS8 474 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 ANAPC5Q9UJX4 755 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 CNOT6Q9ULM6 557 aaKnown RBP6.46□□□□□ -1.38
CD44-204ENST00000279452 TCAF1Q9Y4C2 921 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 MAD1L1Q9Y6D9 718 aa6.46□□□□□ -1.38
CD44-204ENST00000279452 OTOGLQ3ZCN5 2332 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 RHPN2P1A8MT19 583 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 GPR89AB7ZAQ6 455 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 GAPDHSO14556 408 aaPredicted RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 KMOO15229 486 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 FANCGO15287 622 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 TTI1O43156 1089 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 NUAK1O60285 661 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 DNAJC6O75061 913 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 AVILO75366 819 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 TMEM63AO94886 807 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 TRIM16O95361 564 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 GOT2P00505 430 aaKnown RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 FUCA1P04066 466 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 ADRB1P08588 477 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 GPR89BP0CG08 455 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 PRSS56P0CW18 603 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 GIMD1P0DJR0 217 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 CKMT1AP12532 417 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 PAMP19021 973 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 ADRA1DP25100 572 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 MAPK9P45984 424 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 NPY2RP49146 381 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 ARSDP51689 593 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 MAZP56270 477 aaKnown RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 CLDN6P56747 220 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 MRPS25P82663 173 aaKnown RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 CDK16Q00536 496 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 CACNG1Q06432 222 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 PTK6Q13882 451 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 KCNJ11Q14654 390 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 KHDC1Q4VXA5 237 aaKnown RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 C14orf28Q4W4Y0 310 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 FASTKD1Q53R41 847 aaKnown RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 PCID2Q5JVF3 399 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 TSTD2Q5T7W7 516 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 LRRC8BQ6P9F7 803 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 LVRNQ6Q4G3 990 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 TMEM220Q6QAJ8 160 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 AFTPHQ6ULP2 937 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 CES3Q6UWW8 571 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 SYDE1Q6ZW31 735 aaPredicted RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 NLRP9Q7RTR0 991 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 SNX20Q7Z614 316 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 GLRX5Q86SX6 157 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 SLCO6A1Q86UG4 719 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 SERPINA9Q86WD7 417 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 JAMLQ86YT9 394 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 SFTPA2Q8IWL1 248 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 TRIM48Q8IWZ4 208 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 KLHDC8BQ8IXV7 354 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 NXPE1Q8N323 547 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 SDR16C5Q8N3Y7 309 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 BEND7Q8N7W2 519 aaPredicted RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 DDHD1Q8NEL9 900 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 GPBAR1Q8TDU6 330 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 PATE1Q8WXA2 126 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 NAT6Q93015 286 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 HDAC10Q969S8 669 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 CCDC74AQ96AQ1 378 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 CDKN2AIPNLQ96HQ2 116 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 RANBP9Q96S59 729 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 TTC1Q99614 292 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 COPS8Q99627 209 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 CCDC3Q9BQI4 270 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 BOCQ9BWV1 1114 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 IL22Q9GZX6 179 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 VPS37BQ9H9H4 285 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 XAB2Q9HCS7 855 aaKnown RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 CHRAC1Q9NRG0 131 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 SPATS2LQ9NUQ6 558 aaKnown RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 SLC2A6Q9UGQ3 507 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 PADI4Q9UM07 663 aa6.45□□□□□ -1.38
CD44-204ENST00000279452 PCYT1BQ9Y5K3 369 aaPredicted RBP6.45□□□□□ -1.38
CD44-204ENST00000279452 TP53BP1Q12888 1972 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 TRPM6Q9BX84 2022 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 SDK1Q7Z5N4 2213 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 UBA6A0AVT1 1052 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 CCDC162PA2VCL2 907 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 FAM149AA5PLN7 773 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 MROH6A6NGR9 719 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 EFCAB8A8MWE9 144 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 KIF2AO00139 706 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 AGRPO00253 132 aa6.44□□□□□ -1.38
CD44-204ENST00000279452 DNALI1O14645 258 aaPredicted RBP6.44□□□□□ -1.38
CD44-204ENST00000279452 POP7O75817 140 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms