RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TRIP4Q15650 581 aaPredicted RBP12.83□□□□□ -0.35
C9orf3-201ENST00000277198 TYSND1Q2T9J0 566 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 KIF19Q2TAC6 998 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 KCTD21Q4G0X4 260 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 PABPC1LQ4VXU2 614 aaKnown RBP12.83□□□□□ -0.35
C9orf3-201ENST00000277198 MTX3Q5HYI7 312 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 ALG1LQ6GMV1 187 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 SPATA19Q7Z5L4 167 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 DDX53Q86TM3 631 aaKnown RBP12.83□□□□□ -0.35
C9orf3-201ENST00000277198 PHYKPLQ8IUZ5 450 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 TRIML2Q8N7C3 387 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 PTGR2Q8N8N7 351 aaPredicted RBP12.83□□□□□ -0.35
C9orf3-201ENST00000277198 MRPL43Q8N983 215 aaKnown RBP12.83□□□□□ -0.35
C9orf3-201ENST00000277198 STAG3L4Q8TBR4 150 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 TWIST2Q8WVJ9 160 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 TFAP2CQ92754 450 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 KIAA1191Q96A73 305 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 PPWD1Q96BP3 646 aaKnown RBP12.83□□□□□ -0.35
C9orf3-201ENST00000277198 TBATAQ96M53 351 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 KLHL5Q96PQ7 755 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 ATOH8Q96SQ7 321 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 TMEM175Q9BSA9 504 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 TMEM79Q9BSE2 394 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 SEMA6AQ9H2E6 1030 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 PFDN4Q9NQP4 134 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.83□□□□□ -0.35
C9orf3-201ENST00000277198 MARCH4Q9P2E8 410 aaPredicted RBP12.83□□□□□ -0.35
C9orf3-201ENST00000277198 MAP10Q9P2G4 905 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 CEPT1Q9Y6K0 416 aa12.83□□□□□ -0.35
C9orf3-201ENST00000277198 KANSL1LA0AUZ9 987 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 GRXCR2A6NFK2 248 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 CCDC160A6NGH7 325 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 KERAO60938 352 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 GOT2P00505 430 aaKnown RBP12.83□□□□□ -0.36
C9orf3-201ENST00000277198 HDCP19113 662 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 PRKCQQ04759 706 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 LCP2Q13094 533 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 SERINC3Q13530 473 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 KCNC3Q14003 757 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 POLD3Q15054 466 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-201ENST00000277198 AAK1Q2M2I8 961 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 ALFQ53S48 1182 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 HMBOX1Q6NT76 420 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 ZNF549Q6P9A3 640 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 TFAP2DQ7Z6R9 452 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 RETREG3Q86VR2 466 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 SCN4BQ8IWT1 228 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 OR9I1Q8NGQ6 314 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 RMND5BQ96G75 393 aaPredicted RBP12.83□□□□□ -0.36
C9orf3-201ENST00000277198 MSLNLQ96KJ4 702 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 C3orf30Q96M34 536 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 CCT7Q99832 543 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 AARSD1Q9BTE6 412 aaKnown RBP12.83□□□□□ -0.36
C9orf3-201ENST00000277198 C1QTNF3Q9BXJ4 246 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 NUSAP1Q9BXS6 441 aaKnown RBP12.83□□□□□ -0.36
C9orf3-201ENST00000277198 TRIM54Q9BYV2 358 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 GPR62Q9BZJ7 368 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 DERL2Q9GZP9 239 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 NOL11Q9H8H0 719 aaKnown RBP12.83□□□□□ -0.36
C9orf3-201ENST00000277198 CLK4Q9HAZ1 481 aaKnown RBP12.83□□□□□ -0.36
C9orf3-201ENST00000277198 MID1IP1Q9NPA3 183 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 OLAHQ9NV23 265 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 CRYL1Q9Y2S2 319 aa12.83□□□□□ -0.36
C9orf3-201ENST00000277198 TDRD15B5MCY1 1934 aaKnown RBP12.82□□□□□ -0.36
C9orf3-201ENST00000277198 NYNRINQ9P2P1 1898 aaKnown RBP12.82□□□□□ -0.36
C9orf3-201ENST00000277198 ATP6AP2A0A1C7CYW4 349 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 TRIM64CA6NLI5 447 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 SYCE1LA8MT33 242 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 CLASP2O75122 1294 aaKnown RBP12.82□□□□□ -0.36
C9orf3-201ENST00000277198 ATP6AP2O75787 350 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 BMP10O95393 424 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 EFEMP2O95967 443 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 GPIP06744 558 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 CTSAP10619 480 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 PSMA3P25788 255 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 PSMA4P25789 261 aaKnown RBP12.82□□□□□ -0.36
C9orf3-201ENST00000277198 GRIA3P42263 894 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 STC1P52823 247 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 TIAL1Q01085 375 aaKnown RBP eCLIP12.82□□□□□ -0.36
C9orf3-201ENST00000277198 RING1Q06587 406 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 IHHQ14623 411 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 SLC39A12Q504Y0 691 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 FBXL22Q6P050 247 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 CYP2R1Q6VVX0 501 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 RPS27LQ71UM5 84 aaKnown RBP12.82□□□□□ -0.36
C9orf3-201ENST00000277198 SLC15A3Q8IY34 581 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 OR52K2Q8NGK3 314 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 OR4L1Q8NH43 312 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 ADAMTS16Q8TE57 1224 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 CANT1Q8WVQ1 401 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 SLC29A1Q99808 456 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 FBRSL1Q9HCM7 1045 aaKnown RBP12.82□□□□□ -0.36
C9orf3-201ENST00000277198 CATSPERZQ9NTU4 200 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 RSL24D1Q9UHA3 163 aaKnown RBP12.82□□□□□ -0.36
C9orf3-201ENST00000277198 NUDT5Q9UKK9 219 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 HCFC2Q9Y5Z7 792 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 PTPRDP23468 1912 aa12.82□□□□□ -0.36
C9orf3-201ENST00000277198 DHRS12A0PJE2 317 aa12.81□□□□□ -0.36
C9orf3-201ENST00000277198 ZNF701M0R085 212 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-201ENST00000277198 NME4O00746 187 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms