RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 GPR33Q49SQ1 333 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 LYPLAL1Q5VWZ2 237 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 CYHR1Q6ZMK1 362 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 PELI3Q8N2H9 469 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 FBXO39Q8N4B4 442 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 AFAP1L2Q8N4X5 818 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 C12orf76Q8N812 135 aaPredicted RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 ACTRT2Q8TDY3 377 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 SMG7Q92540 1137 aaKnown RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 RSPRY1Q96DX4 576 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 PDLIM5Q96HC4 596 aaKnown RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 C1QTNF3Q9BXJ4 246 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 CLPBQ9H078 707 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 LOC100653049A0A140TA62 436 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 A0A1W2PQ67 120 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 KRT34O76011 436 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 CDK14O94921 469 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 CYP17A1P05093 508 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 POLR2EP19388 210 aaKnown RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 HK3P52790 923 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 MXRA7P84157 204 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 SLC25A3Q00325 362 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 UGT3A2Q3SY77 523 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 NXNQ6DKJ4 435 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 GDPD4Q6W3E5 623 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 CHSY3Q70JA7 882 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 KIAA1958Q8N8K9 716 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 CEP70Q8NHQ1 597 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 SORCS1Q8WY21 1168 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 NSUN5Q96P11 429 aaKnown RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 CATSPER2Q96P56 530 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 TTC1Q99614 292 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 BRD9Q9H8M2 597 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 SARS2Q9NP81 518 aaKnown RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 FIS1Q9Y3D6 152 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 PRSS21Q9Y6M0 314 aa16.47■□□□□ 0.23
CCDC40-201ENST00000269318 NUP210Q8TEM1 1887 aaPredicted RBP16.47■□□□□ 0.23
CCDC40-201ENST00000269318 STX16-NPEPL1H3BU86 382 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 PPP6CO00743 305 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 STX16O14662 325 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 FGF4P08620 206 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 RPS17P08708 135 aaKnown RBP16.46■□□□□ 0.23
CCDC40-201ENST00000269318 CISD3P0C7P0 127 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 EEF1DP29692 281 aaKnown RBP16.46■□□□□ 0.23
CCDC40-201ENST00000269318 FAM219BQ5XKK7 198 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 CLEC6AQ6EIG7 209 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 PTRHD1Q6GMV3 140 aaKnown RBP16.46■□□□□ 0.23
CCDC40-201ENST00000269318 ULK2Q8IYT8 1036 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 NXPE1Q8N323 547 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 LKAAEAR1Q8TD35 194 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 CYB5D2Q8WUJ1 264 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 WDR60Q8WVS4 1066 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 THTPAQ9BU02 230 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 CIPCQ9C0C6 399 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 PIDD1Q9HB75 910 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 GNPTGQ9UJJ9 305 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 L3MBTL1Q9Y468 752 aa16.46■□□□□ 0.23
CCDC40-201ENST00000269318 COPG1Q9Y678 874 aaKnown RBP16.46■□□□□ 0.23
CCDC40-201ENST00000269318 VASPP50552 380 aaPredicted RBP16.46■□□□□ 0.22
CCDC40-201ENST00000269318 KPNB1Q14974 876 aaKnown RBP16.46■□□□□ 0.22
CCDC40-201ENST00000269318 EML3Q32P44 896 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 MACC1Q6ZN28 852 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 SCUBE1Q8IWY4 988 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 CLDN19Q8N6F1 224 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 NAT14Q8WUY8 206 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 OSCP1Q8WVF1 389 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 CLPTM1LQ96KA5 538 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 KLHL32Q96NJ5 620 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 RTKNQ9BST9 563 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 RNPEPL1Q9HAU8 725 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 ZBTB26Q9HCK0 441 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 DUS2Q9NX74 493 aaKnown RBP16.46■□□□□ 0.22
CCDC40-201ENST00000269318 B4GALT6Q9UBX8 382 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 CRLS1Q9UJA2 301 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 G3BP2Q9UN86 482 aaKnown RBP16.46■□□□□ 0.22
CCDC40-201ENST00000269318 YBX2Q9Y2T7 364 aaKnown RBP16.46■□□□□ 0.22
CCDC40-201ENST00000269318 WASF2Q9Y6W5 498 aa16.46■□□□□ 0.22
CCDC40-201ENST00000269318 PDE4DIPQ5VU43 2346 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 ATG2AQ2TAZ0 1938 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 A0A088AWK7 358 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 RGSL1A5PLK6 1076 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 GOLGA8CPA6NN73 597 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 TTC34A8MYJ7 566 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 HOXC11O43248 304 aaPredicted RBP16.45■□□□□ 0.22
CCDC40-201ENST00000269318 C1SP09871 688 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 ARSAP15289 507 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 ITGAXP20702 1163 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 TCEAL5Q5H9L2 206 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 TRIM68Q6AZZ1 485 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 TMC5Q6UXY8 1006 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 RFLNAQ6ZTI6 216 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 CLYBLQ8N0X4 340 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 ENDOVQ8N8Q3 282 aaKnown RBP16.45■□□□□ 0.22
CCDC40-201ENST00000269318 ASIC4Q96FT7 647 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 MARK4Q96L34 752 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 FAM161BQ96MY7 647 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 HTATIP2Q9BUP3 242 aa16.45■□□□□ 0.22
CCDC40-201ENST00000269318 NKX1-2Q9UD57 310 aaPredicted RBP16.45■□□□□ 0.22
CCDC40-201ENST00000269318 TMCO1Q9UM00 188 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms