RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 J3KR12 359 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 SHOX2O60902 331 aaPredicted RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 SIN3BO75182 1162 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 HSPA7P48741 367 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 RGS1Q08116 209 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 UPP1Q16831 310 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 USP39Q53GS9 565 aaKnown RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 ANXA8L1Q5VT79 327 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 MSANTD2Q6P1R3 559 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 TMPRSS11BQ86T26 416 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 CFAP206Q8IYR0 622 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 CPSF7Q8N684 471 aaKnown RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 CIDEBQ9UHD4 219 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 CNTN6Q9UQ52 1028 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 MYH11P35749 1972 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 TTC24A2A3L6 582 aaPredicted RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 BCL10O95999 233 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 IFNA16P05015 189 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 TAF1AQ15573 450 aaPredicted RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 LSM12Q3MHD2 195 aaKnown RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 ZNF544Q6NX49 715 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 ARHGAP36Q6ZRI8 547 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 VN1R5Q7Z5H4 357 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 CLVS1Q8IUQ0 354 aaPredicted RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 RBM15BQ8NDT2 890 aaKnown RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 OR13C4Q8NGS5 318 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 PPCDCQ96CD2 204 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 VMP1Q96GC9 406 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 PIWIL1Q96J94 861 aaKnown RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 SGK2Q9HBY8 427 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 CCDC88AQ3V6T2 1871 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 GRIN2DO15399 1336 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 GABRDO14764 452 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 GPR32O75388 356 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 MYL12AP19105 171 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 HOXA11P31270 313 aaPredicted RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 CDH5P33151 784 aaPredicted RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 SSR2P43308 183 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 RANBP1P43487 201 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 COPZ1P61923 177 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 RNF19BQ6ZMZ0 732 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 GK5Q6ZS86 529 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 CMTM8Q8IZV2 173 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 CYP4X1Q8N118 509 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 MPP5Q8N3R9 675 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 ZNF599Q96NL3 588 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 NOL11Q9H8H0 719 aaKnown RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 PNPLA8Q9NP80 782 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 AKAP7Q9P0M2 348 aaPredicted RBP15.3■□□□□ 0.04
TIMP3-201ENST00000266085 TMEM59LQ9UK28 342 aa15.3■□□□□ 0.04
TIMP3-201ENST00000266085 SLC31A1O15431 190 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 ITGA2P17301 1181 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 IDSP22304 550 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 VWA5B1Q5TIE3 1220 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 C16orf62Q7Z3J2 963 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 AMIGO2Q86SJ2 522 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 KIAA2013Q8IYS2 634 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 OR2T12Q8NG77 320 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 AIF1LQ9BQI0 150 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 FNIP2Q9P278 1114 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 NDRG2Q9UN36 371 aaKnown RBP15.29■□□□□ 0.04
TIMP3-201ENST00000266085 COPG1Q9Y678 874 aaKnown RBP15.29■□□□□ 0.04
TIMP3-201ENST00000266085 CCDC162PA2VCL2 907 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 PRR23D1E9PI22 279 aaPredicted RBP15.29■□□□□ 0.04
TIMP3-201ENST00000266085 NDUFB5O43674 189 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 TCEA3O75764 348 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 PRR23D2P0DMB1 279 aaPredicted RBP15.29■□□□□ 0.04
TIMP3-201ENST00000266085 UMPSP11172 480 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 CSF2RAP15509 400 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 KIR3DL1P43629 444 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 BNIP1Q12981 228 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 TSNQ15631 228 aaKnown RBP15.29■□□□□ 0.04
TIMP3-201ENST00000266085 CLEC6AQ6EIG7 209 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 HERVK_113Q902F9 699 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 IGSF21Q96ID5 467 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 DNAJC28Q9NX36 388 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 INSL5Q9Y5Q6 135 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 ARL5AQ9Y689 179 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 KAT6AQ92794 2004 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 OR51F1A6NGY5 319 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 UGT1A9O60656 530 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 CLDN9O95484 217 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 SOD2P04179 222 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 NSG1P42857 185 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 SLC1A2P43004 574 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 BNIPLQ7Z465 357 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 GATAD2AQ86YP4 633 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 IFNLR1Q8IU57 520 aaPredicted RBP15.29■□□□□ 0.04
TIMP3-201ENST00000266085 OFCC1Q8IZS5 231 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 CLHC1Q8NHS4 586 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 CLIP3Q96DZ5 547 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 TMEM209Q96SK2 561 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 UGT1A7Q9HAW7 530 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 UGT1A10Q9HAW8 530 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 UGT1A8Q9HAW9 530 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 SQORQ9Y6N5 450 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 KNL1Q8NG31 2342 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 MEIS3P2A8K0S8 358 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 OR10H2O60403 315 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 MSX2P35548 267 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms