RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SLC9A3P48764 834 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 SEMA5AQ13591 1074 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 THAP5Q7Z6K1 395 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 NLRP8Q86W28 1048 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 MAP4K3Q8IVH8 894 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 MCUQ8NE86 351 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 RDH11Q8TC12 318 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 AIFM2Q9BRQ8 373 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 YTHDF1Q9BYJ9 559 aaKnown RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 OSGIN1Q9UJX0 560 aa8.72□□□□□ -1.01
VAPB-201ENST00000265619 LAMA2P24043 3122 aaKnown RBP8.72□□□□□ -1.01
VAPB-201ENST00000265619 AGAP5A6NIR3 686 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 SHOXO15266 292 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 CNMDO75829 334 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 SOX9P48436 509 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 NDST1P52848 882 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 OAZ1P54368 228 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 CBLBQ13191 982 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 PLA2G4EQ3MJ16 856 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 LIPMQ5VYY2 423 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.71□□□□□ -1.01
VAPB-201ENST00000265619 SAMD14Q8IZD0 417 aaPredicted RBP8.71□□□□□ -1.01
VAPB-201ENST00000265619 GPD1LQ8N335 351 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 RTP4Q96DX8 246 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 C3orf30Q96M34 536 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 TMEM74Q96NL1 305 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 RNF157Q96PX1 679 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 C17orf62Q9BQA9 187 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 C1QTNF1Q9BXJ1 281 aa8.71□□□□□ -1.01
VAPB-201ENST00000265619 H3BQ06 376 aaPredicted RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 SMLR1H3BR10 107 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 SLC1A7O00341 560 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 ZNF780AO75290 641 aaPredicted RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 VTNP04004 478 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 CAPN3P20807 821 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 KCNA5P22460 613 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 ARSFP54793 590 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 PRKAA1Q13131 559 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 ZMYND11Q15326 602 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 CLEC6AQ6EIG7 209 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 C4orf19Q8IY42 314 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 CCDC185Q8N715 623 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 PCNPQ8WW12 178 aaKnown RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 SEPT1Q8WYJ6 367 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 MARC2Q969Z3 335 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 LRRC39Q96DD0 335 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 TRMT61AQ96FX7 289 aaKnown RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 METTL2AQ96IZ6 378 aaKnown RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 NODALQ96S42 347 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 RBBP8Q99708 897 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 FRMD8P1Q9BZ68 369 aaPredicted RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 ERVK13-1Q9NX77 482 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 SLAMF8Q9P0V8 285 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 ACTR3BQ9P1U1 418 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 NUFIP1Q9UHK0 495 aaKnown RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 ZNF639Q9UID6 485 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 TBC1D24Q9ULP9 559 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 MAN2B2Q9Y2E5 1009 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 CIB4A0PJX0 185 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 EVPLLA8MZ36 301 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 NR5A2O00482 541 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 TFECO14948 347 aaPredicted RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 B3GALNT1O75752 331 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 PTTG1O95997 202 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 ALPLP05186 524 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 KRT19P08727 400 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 PRKACGP22612 351 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 FMO3P31513 532 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 STX5Q13190 355 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 PON2Q15165 354 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 HADHQ16836 314 aaKnown RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 FUT11Q495W5 492 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 XKR3Q5GH77 459 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 ZYG11AQ6WRX3 759 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 VN1R5Q7Z5H4 357 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 STK32CQ86UX6 486 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 PNPLA1Q8N8W4 532 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 TMBIM1Q969X1 311 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 LGALS12Q96DT0 336 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 SCYL1Q96KG9 808 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 ZIC5Q96T25 663 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 ACAT2Q9BWD1 397 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 MMP28Q9H239 520 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 SLA2Q9H6Q3 261 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 CARS2Q9HA77 564 aaKnown RBP8.71□□□□□ -1.02
VAPB-201ENST00000265619 CYP4F12Q9HCS2 524 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 SLC39A10Q9ULF5 831 aa8.71□□□□□ -1.02
VAPB-201ENST00000265619 CCDC154A6NI56 674 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 KPNA7A9QM74 516 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 UBDO15205 165 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 ENDOD1O94919 500 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 PSMB9P28065 219 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 GP5P40197 560 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 RAP1GAPP47736 663 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 SERPINH1P50454 418 aaKnown RBP8.7□□□□□ -1.02
VAPB-201ENST00000265619 BCAT1P54687 386 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 CD83Q01151 205 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 SMN1Q16637 294 aaKnown RBP8.7□□□□□ -1.02
VAPB-201ENST00000265619 ZNF181Q2M3W8 571 aa8.7□□□□□ -1.02
VAPB-201ENST00000265619 BOLA3Q53S33 107 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms